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Aliases for CCNJP1 Gene

Subcategory (RNA class) for CCNJP1 Gene

lncRNA

Aliases for CCNJP1 Gene

  • Cyclin J Pseudogene 1 2 3 5
  • Cyclin J Pseudogene 2
  • CCNJP 3

External Ids for CCNJP1 Gene

ORGUL Members for CCNJP1 Gene

Previous HGNC Symbols for CCNJP1 Gene

  • CCNJP

Previous GeneCards Identifiers for CCNJP1 Gene

  • GC07M056110

Summaries for CCNJP1 Gene

GeneCards Summary for CCNJP1 Gene

CCNJP1 (Cyclin J Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for CCNJP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCNJP1 Gene

Genomics for CCNJP1 Gene

GeneHancer (GH) Regulatory Elements for CCNJP1 Gene

Promoters and enhancers for CCNJP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J055364 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 14.6 +863.6 863641 3.4 HDGF PKNOX1 SMAD1 ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B ZNF766 LANCL2 CALM1P2 LOC100130121 SUMF2 LOC100420540 CICP12 LOC101409255 CCNJP1 SEPT14P24 ENSG00000203462
GH07J056175 Enhancer 0.4 FANTOM5 0.2 +53.8 53818 0.3 SUZ12 LOC100130909 GC07P056175 NUPR2 CCNJP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CCNJP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CCNJP1 Gene

Genomic Locations for CCNJP1 Gene
chr7:56,228,631-56,229,782
(GRCh38/hg38)
Size:
1,152 bases
Orientation:
Minus strand
chr7:56,296,324-56,297,475
(GRCh37/hg19)

Genomic View for CCNJP1 Gene

Genes around CCNJP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CCNJP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CCNJP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCNJP1 Gene

Function for CCNJP1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCNJP1 Gene

Localization for CCNJP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CCNJP1 Gene

Pathways & Interactions for CCNJP1 Gene

SuperPathways for CCNJP1 Gene

No Data Available

Interacting Proteins for CCNJP1 Gene

Gene Ontology (GO) - Biological Process for CCNJP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CCNJP1 Gene

Drugs & Compounds for CCNJP1 Gene

No Compound Related Data Available

Transcripts for CCNJP1 Gene

mRNA/cDNA for CCNJP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CCNJP1 Gene

No ASD Table

Relevant External Links for CCNJP1 Gene

GeneLoc Exon Structure for
CCNJP1
ECgene alternative splicing isoforms for
CCNJP1

Expression for CCNJP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CCNJP1 Gene

mRNA differential expression in normal tissues according to GTEx for CCNJP1 Gene

This gene is overexpressed in Testis (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of CCNJP1 Gene:

CCNJP1
genes like me logo Genes that share expression patterns with CCNJP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CCNJP1 Gene

Orthologs for CCNJP1 Gene

Evolution for CCNJP1 Gene

ENSEMBL:
Gene Tree for CCNJP1 (if available)
TreeFam:
Gene Tree for CCNJP1 (if available)

No data available for Orthologs for CCNJP1 Gene

Paralogs for CCNJP1 Gene

No data available for Paralogs for CCNJP1 Gene

Variants for CCNJP1 Gene

Additional Variant Information for CCNJP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CCNJP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CCNJP1 Gene

Disorders for CCNJP1 Gene

No disorders were found for CCNJP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CCNJP1 Gene

Publications for CCNJP1 Gene

No publications were found for CCNJP1 Gene.

Products for CCNJP1 Gene

Sources for CCNJP1 Gene

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