Aliases for CCND3P1 Gene

Aliases for CCND3P1 Gene

  • Cyclin D3 Pseudogene 1 2 3 5
  • Cyclin D3 Pseudogene 2
  • CCND3P1 5
  • CCND3P 3

External Ids for CCND3P1 Gene

Previous HGNC Symbols for CCND3P1 Gene

  • CCND3P

Summaries for CCND3P1 Gene

GeneCards Summary for CCND3P1 Gene

CCND3P1 (Cyclin D3 Pseudogene 1) is a Pseudogene. Diseases associated with CCND3P1 include Hepatocellular Carcinoma.

Additional gene information for CCND3P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CCND3P1 Gene

Genomics for CCND3P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CCND3P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J030430 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 5.3 -31.1 -31107 8.8 BCLAF1 SP1 NCOR1 ZNF207 MYC ZNF600 IKZF1 ZNF580 ZNF592 ZMYM3 MAP3K8 lnc-MTPAP-7 SPTLC1P1 CCND3P1 HSALNG0077026 HSALNG0077027 LYZL2
GH10J030412 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 5.7 -14.7 -14662 14.6 LARP7 BCLAF1 SP1 ZNF654 IKZF1 MYC ZNF592 POLR2A CEBPA ATF3 MAP3K8 MTPAP ZEB1-AS1 CCND3P1 lnc-MTPAP-7
GH10J030444 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 4.7 -42.6 -42584 3.5 ZNF217 MBD2 CTBP1 CUX1 SIN3A JUND SMARCE1 PKNOX1 MAFK FOXA1 MAP3K8 CCND3P1 HSALNG0077026 HSALNG0077028 LYZL2
GH10J030426 Enhancer 0.9 ENCODE dbSUPER 0.4 -23.9 -23853 1.9 BCLAF1 SP1 BCL11A ZNF316 EBF1 MAX BHLHE40 SPI1 BATF ELF1 MAP3K8 lnc-MTPAP-7 CCND3P1 MTPAP
GH10J030384 Enhancer 0.8 Ensembl CraniofacialAtlas 0.4 +19.1 19120 1 MYC NFIC MNT CTCF SIN3A RAD21 PKNOX1 MAX EP400 NRF1 ENSG00000235679 lnc-MAP3K8-9 MAP3K8 MTPAP CCND3P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CCND3P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CCND3P1 Gene

Latest Assembly
chr10:30,403,194-30,403,821
(GRCh38/hg38)
Size:
628 bases
Orientation:
Minus strand

Previous Assembly
chr10:30,692,123-30,692,750
(GRCh37/hg19 by Entrez Gene)
Size:
628 bases
Orientation:
Minus strand

chr10:30,692,126-30,692,705
(GRCh37/hg19 by Ensembl)
Size:
580 bases
Orientation:
Minus strand

Genomic View for CCND3P1 Gene

Genes around CCND3P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CCND3P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CCND3P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCND3P1 Gene

Proteins for CCND3P1 Gene

Post-translational modifications for CCND3P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CCND3P1 Gene

Domains & Families for CCND3P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CCND3P1 Gene

Function for CCND3P1 Gene

Phenotypes From GWAS Catalog for CCND3P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCND3P1 Gene

Localization for CCND3P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CCND3P1 Gene

Pathways & Interactions for CCND3P1 Gene

PathCards logo

SuperPathways for CCND3P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CCND3P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CCND3P1 Gene

Drugs & Compounds for CCND3P1 Gene

No Compound Related Data Available

Transcripts for CCND3P1 Gene

mRNA/cDNA for CCND3P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CCND3P1 Gene

No ASD Table

Relevant External Links for CCND3P1 Gene

GeneLoc Exon Structure for
CCND3P1

Expression for CCND3P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CCND3P1 Gene

genes like me logo Genes that share expression patterns with CCND3P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CCND3P1 Gene

Orthologs for CCND3P1 Gene

Evolution for CCND3P1 Gene

ENSEMBL:
Gene Tree for CCND3P1 (if available)
TreeFam:
Gene Tree for CCND3P1 (if available)
Alliance of Genome Resources:
Additional Orthologs for CCND3P1

No data available for Orthologs for CCND3P1 Gene

Paralogs for CCND3P1 Gene

No data available for Paralogs for CCND3P1 Gene

Variants for CCND3P1 Gene

Additional Variant Information for CCND3P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CCND3P1
Leiden Open Variation Database (LOVD)
CCND3P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CCND3P1 Gene

Disorders for CCND3P1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for CCND3P1 Gene - From: LNC

Disorder Aliases PubMed IDs
hepatocellular carcinoma
  • hcc
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with CCND3P1: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for CCND3P1 Gene

Publications for CCND3P1 Gene

  1. Molecular cloning and chromosomal mapping of CCND genes encoding human D-type cyclins. (PMID: 1386336) Xiong Y … Ward DC (Genomics 1992) 2 3
  2. Genomic organization, chromosomal localization, and independent expression of human cyclin D genes. (PMID: 1386335) Inaba T … Look AT (Genomics 1992) 2 3
  3. Identification of long noncoding RNA expression profile in oxaliplatin-resistant hepatocellular carcinoma cells. (PMID: 27729273) Yin X … Ren ZG (Gene 2017) 72

Products for CCND3P1 Gene

Sources for CCND3P1 Gene