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Aliases for CCDC37-AS1 Gene

Subcategory (RNA class) for CCDC37-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CCDC37-AS1 Gene

  • CCDC37 Antisense RNA 1 (Head To Head) 2 3 5

External Ids for CCDC37-AS1 Gene

Previous GeneCards Identifiers for CCDC37-AS1 Gene

  • GC03M126084

Summaries for CCDC37-AS1 Gene

GeneCards Summary for CCDC37-AS1 Gene

CCDC37-AS1 (CCDC37 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for CCDC37-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCDC37-AS1 Gene

Genomics for CCDC37-AS1 Gene

GeneHancer (GH) Regulatory Elements for CCDC37-AS1 Gene

Promoters and enhancers for CCDC37-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I126394 Promoter 0.6 EPDnew 550.8 -0.2 -154 0.1 EZH2 CFAP100 CCDC37-AS1 LOC105374089
GH03I126388 Enhancer 1.2 Ensembl ENCODE 23.5 +5.5 5460 1.4 ATF1 FOXA2 ARNT ARID4B SIN3A ZBTB7B ZNF48 YY1 ZNF121 ARID2 CCDC37-AS1 KLF15
GH03I126266 Enhancer 1.3 Ensembl ENCODE dbSUPER 10 +126.9 126938 3.4 ATF1 ARID4B SIN3A DMAP1 ZNF48 ETS1 YY1 FOS ATF7 RXRA ENSG00000250934 KLF15 CCDC37-AS1 CFAP100 ALDH1L1 ALDH1L1-AS2 ENPP7P4 ENSG00000251448 GC03P126153
GH03I126373 Enhancer 0.7 ENCODE dbSUPER 16 +20.7 20737 0.6 RXRA ZNF184 ZFP64 HNF4A RAD21 NR2F2 CCDC37-AS1 CFAP100 KLF15
GH03I126420 Enhancer 0.5 ENCODE 12.7 -25.8 -25782 0.2 SAP130 ETV4 EBF1 THRB RARA GABPA RXRB CFAP100 CCDC37-AS1 LOC105374089
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CCDC37-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CCDC37-AS1 Gene

Genomic Locations for CCDC37-AS1 Gene
chr3:126,393,032-126,394,851
(GRCh38/hg38)
Size:
1,820 bases
Orientation:
Minus strand
chr3:126,082,705-126,113,694
(GRCh37/hg19)

Genomic View for CCDC37-AS1 Gene

Genes around CCDC37-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CCDC37-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CCDC37-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCDC37-AS1 Gene

Proteins for CCDC37-AS1 Gene

Post-translational modifications for CCDC37-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CCDC37-AS1 Gene

Domains & Families for CCDC37-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CCDC37-AS1 Gene

Function for CCDC37-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCDC37-AS1 Gene

Localization for CCDC37-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CCDC37-AS1 Gene

Pathways & Interactions for CCDC37-AS1 Gene

SuperPathways for CCDC37-AS1 Gene

No Data Available

Interacting Proteins for CCDC37-AS1 Gene

Gene Ontology (GO) - Biological Process for CCDC37-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CCDC37-AS1 Gene

Drugs & Compounds for CCDC37-AS1 Gene

No Compound Related Data Available

Transcripts for CCDC37-AS1 Gene

mRNA/cDNA for CCDC37-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CCDC37-AS1 Gene

No ASD Table

Relevant External Links for CCDC37-AS1 Gene

GeneLoc Exon Structure for
CCDC37-AS1
ECgene alternative splicing isoforms for
CCDC37-AS1

Expression for CCDC37-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CCDC37-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for CCDC37-AS1 Gene

This gene is overexpressed in Testis (x52.0).
genes like me logo Genes that share expression patterns with CCDC37-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CCDC37-AS1 Gene

Orthologs for CCDC37-AS1 Gene

Evolution for CCDC37-AS1 Gene

ENSEMBL:
Gene Tree for CCDC37-AS1 (if available)
TreeFam:
Gene Tree for CCDC37-AS1 (if available)

No data available for Orthologs for CCDC37-AS1 Gene

Paralogs for CCDC37-AS1 Gene

No data available for Paralogs for CCDC37-AS1 Gene

Variants for CCDC37-AS1 Gene

Sequence variations from dbSNP and Humsavar for CCDC37-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000066893 -- 126,392,622(-) G/A downstream_transcript_variant
rs1001161453 -- 126,395,608(-) G/A upstream_transcript_variant
rs1001318261 -- 126,395,810(-) G/C upstream_transcript_variant
rs1001432553 -- 126,396,410(-) G/T upstream_transcript_variant
rs1002320920 -- 126,394,770(-) C/T non_coding_transcript_variant

Additional Variant Information for CCDC37-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CCDC37-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CCDC37-AS1 Gene

Disorders for CCDC37-AS1 Gene

Additional Disease Information for CCDC37-AS1

No disorders were found for CCDC37-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CCDC37-AS1 Gene

Publications for CCDC37-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for CCDC37-AS1 Gene

Sources for CCDC37-AS1 Gene

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