Aliases for CCDC18-AS1 Gene

Data sources for CCDC18-AS1 Gene:

RNA type for CCDC18-AS1 Gene


Aliases for CCDC18-AS1 Gene

External Ids for CCDC18-AS1 Gene

Summaries for CCDC18-AS1 Gene

GeneCards Summary for CCDC18-AS1 Gene

CCDC18-AS1 (CCDC18 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for CCDC18-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CCDC18-AS1 Gene

Genomics for CCDC18-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CCDC18-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CCDC18-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CCDC18-AS1 Gene

Latest Assembly
84,734 bases
Minus strand

Previous Assembly
(GRCh37/hg19 by Entrez Gene)
35,703 bases
Minus strand

(GRCh37/hg19 by Ensembl)
83,840 bases
Minus strand

Genomic View for CCDC18-AS1 Gene

Genes around CCDC18-AS1 on UCSC Golden Path with GeneCards custom track
CCDC18-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
CCDC18-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CCDC18-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCDC18-AS1 Gene

Proteins for CCDC18-AS1 Gene

Post-translational modifications for CCDC18-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CCDC18-AS1 Gene

Domains & Families for CCDC18-AS1 Gene

Gene Families for CCDC18-AS1 Gene

genes like me logo Genes that share domains with CCDC18-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CCDC18-AS1 Gene

Function for CCDC18-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCDC18-AS1 Gene

Localization for CCDC18-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CCDC18-AS1 Gene

Pathways & Interactions for CCDC18-AS1 Gene

PathCards logo

SuperPathways for CCDC18-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CCDC18-AS1 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CCDC18-AS1 Gene

Drugs & Compounds for CCDC18-AS1 Gene

No Compound Related Data Available

Transcripts for CCDC18-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for CCDC18-AS1 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00008BA3EB_9606 lncRNA 753 4

Ensembl: ENST00000449305 (view in UCSC) ,

LncBook: HSALNT0010757,

LNCipedia: CCDC18-AS1:14,


URS00008B3CA2_9606 lncRNA 602 4

Ensembl: ENST00000440778 (view in UCSC) ,

LncBook: HSALNT0010715,

LNCipedia: CCDC18-AS1:25,


URS00008B598F_9606 lncRNA 600 4

Ensembl: ENST00000450843 (view in UCSC) ,

LncBook: HSALNT0010711,

LNCipedia: CCDC18-AS1:23,


URS00008B5870_9606 lncRNA 535 4

Ensembl: ENST00000432741 (view in UCSC) ,

LncBook: HSALNT0010727,

LNCipedia: CCDC18-AS1:27,


URS00008BCB14_9606 lncRNA 492 4

Ensembl: ENST00000436200 (view in UCSC) ,

LncBook: HSALNT0010723,

LNCipedia: CCDC18-AS1:30,


CCDC18-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for CCDC18-AS1 Gene

3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for CCDC18-AS1 Gene

No ASD Table

Relevant External Links for CCDC18-AS1 Gene

GeneLoc Exon Structure for

Expression for CCDC18-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for CCDC18-AS1

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CCDC18-AS1 Gene

Orthologs for CCDC18-AS1 Gene

Evolution for CCDC18-AS1 Gene

Gene Tree for CCDC18-AS1 (if available)
Gene Tree for CCDC18-AS1 (if available)
Alliance of Genome Resources:
Additional Orthologs for CCDC18-AS1

No data available for Orthologs for CCDC18-AS1 Gene

Paralogs for CCDC18-AS1 Gene

No data available for Paralogs for CCDC18-AS1 Gene

Variants for CCDC18-AS1 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for CCDC18-AS1 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for CCDC18-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3383393 CNV insertion 20981092
esv3586828 CNV loss 21293372
nsv523951 CNV gain 19592680

Additional Variant Information for CCDC18-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
Leiden Open Variation Database (LOVD)

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for CCDC18-AS1 Gene

Disorders for CCDC18-AS1 Gene

Additional Disease Information for CCDC18-AS1

No disorders were found for CCDC18-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CCDC18-AS1 Gene

Publications for CCDC18-AS1 Gene

  1. Expression Signatures of Long Noncoding RNAs in Adolescent Idiopathic Scoliosis. (PMID: 26421281) Liu XY … Wang YP (BioMed research international 2015) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3

Products for CCDC18-AS1 Gene

Sources for CCDC18-AS1 Gene