Aliases for CCDC11P1 Gene

Aliases for CCDC11P1 Gene

  • Coiled-Coil Domain Containing 11 Pseudogene 1 2 3 5

External Ids for CCDC11P1 Gene

Summaries for CCDC11P1 Gene

GeneCards Summary for CCDC11P1 Gene

CCDC11P1 (Coiled-Coil Domain Containing 11 Pseudogene 1) is a Pseudogene.

Additional gene information for CCDC11P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CCDC11P1 Gene

Genomics for CCDC11P1 Gene

GeneHancer (GH) Regulatory Elements for CCDC11P1 Gene

Promoters and enhancers for CCDC11P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J039598 Enhancer 0.8 Ensembl ENCODE 0.3 -26.9 -26864 2.5 CTCF RAD21 SMC3 FOS FOSL2 CEBPB JUN JUND NR2F1 PRDM1 piR-33804-019 CCDC11P1
GH05J039580 Enhancer 0.6 Ensembl ENCODE 0.4 -8.5 -8529 2 EP300 CEBPB FOXP2 POLR2A DAB2 C9 CCDC11P1 piR-33804-019
GH05J039606 Enhancer 0.8 Ensembl ENCODE 0.3 -33.5 -33526 1.2 TCF12 OSR2 FOXA2 FOS FOSL2 CEBPB JUN GATA3 MAFK JUND piR-33804-019 CCDC11P1
GH05J039579 Enhancer 0.4 Ensembl 0.4 -7.0 -7029 0.2 EZH2 ZNF781 CTCF DAB2 C9 CCDC11P1 piR-33804-019
GH05J039619 Enhancer 0.6 Ensembl 0.3 -46.6 -46629 0.2 FOXA2 JUND RAD21 RXRA MAX HNF4A EGR1 REST HLF FOXA1 DAB2 piR-33804-019 CCDC11P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CCDC11P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CCDC11P1 Gene

Genomic Locations for CCDC11P1 Gene
chr5:39,571,478-39,572,672
(GRCh38/hg38)
Size:
1,195 bases
Orientation:
Minus strand
chr5:39,571,580-39,572,774
(GRCh37/hg19)
Size:
1,195 bases
Orientation:
Minus strand

Genomic View for CCDC11P1 Gene

Genes around CCDC11P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CCDC11P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CCDC11P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCDC11P1 Gene

Proteins for CCDC11P1 Gene

Post-translational modifications for CCDC11P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CCDC11P1 Gene

Domains & Families for CCDC11P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CCDC11P1 Gene

Function for CCDC11P1 Gene

Phenotypes From GWAS Catalog for CCDC11P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCDC11P1 Gene

Localization for CCDC11P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CCDC11P1 Gene

Pathways & Interactions for CCDC11P1 Gene

PathCards logo

SuperPathways for CCDC11P1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for CCDC11P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CCDC11P1 Gene

Drugs & Compounds for CCDC11P1 Gene

No Compound Related Data Available

Transcripts for CCDC11P1 Gene

mRNA/cDNA for CCDC11P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CCDC11P1 Gene

No ASD Table

Relevant External Links for CCDC11P1 Gene

GeneLoc Exon Structure for
CCDC11P1

Expression for CCDC11P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CCDC11P1 Gene

genes like me logo Genes that share expression patterns with CCDC11P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CCDC11P1 Gene

Orthologs for CCDC11P1 Gene

Evolution for CCDC11P1 Gene

ENSEMBL:
Gene Tree for CCDC11P1 (if available)
TreeFam:
Gene Tree for CCDC11P1 (if available)

No data available for Orthologs for CCDC11P1 Gene

Paralogs for CCDC11P1 Gene

No data available for Paralogs for CCDC11P1 Gene

Variants for CCDC11P1 Gene

Additional Variant Information for CCDC11P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CCDC11P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CCDC11P1 Gene

Disorders for CCDC11P1 Gene

No disorders were found for CCDC11P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CCDC11P1 Gene

Publications for CCDC11P1 Gene

No publications were found for CCDC11P1 Gene.

Products for CCDC11P1 Gene

Sources for CCDC11P1 Gene