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Aliases for CBX3P4 Gene

Aliases for CBX3P4 Gene

  • Chromobox 3 Pseudogene 4 2 3 5
  • Chromobox Homolog 3 Pseudogene 4 2 3

External Ids for CBX3P4 Gene

Previous GeneCards Identifiers for CBX3P4 Gene

  • GC12M002898

Summaries for CBX3P4 Gene

GeneCards Summary for CBX3P4 Gene

CBX3P4 (Chromobox 3 Pseudogene 4) is a Pseudogene.

Additional gene information for CBX3P4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CBX3P4 Gene

Genomics for CBX3P4 Gene

GeneHancer (GH) Regulatory Elements for CBX3P4 Gene

Promoters and enhancers for CBX3P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J002794 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 600.7 -1.1 -1145 3.3 HDGF MTA3 SP1 ZFX CC2D1A ELF3 ZNF148 NKRF POLR2A ZNF687 CBX3P4 FKBP4 ITFG2 TULP3 DCP1B ENSG00000258092 ITFG2-AS1
GH12J002792 Enhancer 0.6 Ensembl 600.7 +1.4 1394 1 ZNF652 PKNOX1 ZBTB20 MGA POLR2A ZNF592 ZFP64 ZBTB33 SMARCA4 NR2F6 CBX3P4 PIR42714 PIR48103 GC12M002790 NRIP2 ITFG2-AS1
GH12J002256 Enhancer 1.3 Ensembl ENCODE dbSUPER 55.9 +537.6 537597 1.6 ZNF473 ZNF121 IKZF1 ZNF680 ZNF704 ZNF547 ZNF488 ZNF544 ZNF300 ZNF776 ITFG2 TULP3 DCP1B CBX3P4 IQSEC3P1 ENSG00000227081 CACNA1C-AS4 NRIP2 LINC00942 CACNA1C-IT3
GH12J001992 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 17.8 +799.8 799805 3.4 ZNF473 ELF3 CEBPG RERE MAFK SP1 CREM PRDM1 KAT8 IKZF1 CBX3P4 LINC00942 TULP3 ITFG2 IQSEC3P1 LINC00940 DCP1B FBXL14 GC12M001963 CACNA1C
GH12J002876 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 11.5 -82.7 -82671 4.7 ZFX CBFA2T2 NKRF ZNF121 CEBPG ZNF384 ZNF687 ZSCAN21 AHR TFE3 TULP3 RHNO1 FOXM1 ITFG2 DCP1B CBX3P4 NRIP2 ENSG00000227081 FKBP4 GC12M002869
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CBX3P4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CBX3P4 Gene

Genomic Locations for CBX3P4 Gene
chr12:2,786,931-2,794,295
(GRCh38/hg38)
Size:
7,365 bases
Orientation:
Minus strand
chr12:2,896,097-2,903,461
(GRCh37/hg19)
Size:
7,365 bases
Orientation:
Minus strand

Genomic View for CBX3P4 Gene

Genes around CBX3P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CBX3P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CBX3P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CBX3P4 Gene

Proteins for CBX3P4 Gene

Post-translational modifications for CBX3P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CBX3P4 Gene

Domains & Families for CBX3P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CBX3P4 Gene

Function for CBX3P4 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CBX3P4 Gene

Localization for CBX3P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CBX3P4 Gene

Pathways & Interactions for CBX3P4 Gene

PathCards logo

SuperPathways for CBX3P4 Gene

No Data Available

Interacting Proteins for CBX3P4 Gene

Gene Ontology (GO) - Biological Process for CBX3P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CBX3P4 Gene

Drugs & Compounds for CBX3P4 Gene

No Compound Related Data Available

Transcripts for CBX3P4 Gene

mRNA/cDNA for CBX3P4 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for CBX3P4 Gene

No ASD Table

Relevant External Links for CBX3P4 Gene

GeneLoc Exon Structure for
CBX3P4
ECgene alternative splicing isoforms for
CBX3P4

Expression for CBX3P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CBX3P4 Gene

mRNA differential expression in normal tissues according to GTEx for CBX3P4 Gene

This gene is overexpressed in Testis (x8.0).

NURSA nuclear receptor signaling pathways regulating expression of CBX3P4 Gene:

CBX3P4
genes like me logo Genes that share expression patterns with CBX3P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CBX3P4 Gene

Orthologs for CBX3P4 Gene

Evolution for CBX3P4 Gene

ENSEMBL:
Gene Tree for CBX3P4 (if available)
TreeFam:
Gene Tree for CBX3P4 (if available)

No data available for Orthologs for CBX3P4 Gene

Paralogs for CBX3P4 Gene

No data available for Paralogs for CBX3P4 Gene

Variants for CBX3P4 Gene

Additional Variant Information for CBX3P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CBX3P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CBX3P4 Gene

Disorders for CBX3P4 Gene

No disorders were found for CBX3P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CBX3P4 Gene

Publications for CBX3P4 Gene

No publications were found for CBX3P4 Gene.

No data available for External Links for CBX3P4 Gene

Products for CBX3P4 Gene

Sources for CBX3P4 Gene

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