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Aliases for CBX3P2 Gene

Aliases for CBX3P2 Gene

  • Chromobox 3 Pseudogene 2 2 3 5
  • Chromobox Homolog 3 Pseudogene 2 2

External Ids for CBX3P2 Gene

Summaries for CBX3P2 Gene

GeneCards Summary for CBX3P2 Gene

CBX3P2 (Chromobox 3 Pseudogene 2) is a Pseudogene.

Additional gene information for CBX3P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CBX3P2 Gene

Genomics for CBX3P2 Gene

GeneHancer (GH) Regulatory Elements for CBX3P2 Gene

Promoters and enhancers for CBX3P2 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I002653 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 555.8 -1.4 -1374 6.5 HDGF PKNOX1 CLOCK FOXA2 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 SMCHD1 CBX3P2 METTL4 EMILIN2 NDC80 ENSG00000266783 LPIN2 GC18M002508
GH18I003296 Enhancer 1.3 Ensembl ENCODE 27.9 -641.9 -641882 1.8 PKNOX1 SMAD1 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 IRF4 CBX3P2 METTL4 SMCHD1 ENSG00000266783 GC18P003299 ENSG00000266578
GH18I003445 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.5 -797.6 -797607 14.4 CLOCK MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 TGIF1 METTL4 DLGAP1-AS1 RPL21P127 CBX3P2 MYL12B LOC101927094 GAPLINC GC18P003299
GH18I003245 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.5 -600.7 -600686 22.1 CLOCK ZFP64 FEZF1 DMAP1 YBX1 IRF4 YY1 SLC30A9 ZNF213 E2F8 MYL12B MYL12A MYOM1 LOC104968399 LOC101927044 CBX3P2 LPIN2 EMILIN2 METTL4 SMCHD1
GH18I003591 Promoter/Enhancer 2.1 FANTOM5 Ensembl ENCODE dbSUPER 10.5 -940.6 -940602 9.2 HDGF PKNOX1 SMAD1 FOXA2 MLX ARID4B SIN3A FEZF1 YY1 ZNF143 DLGAP1-AS2 TGIF1 DLGAP1-AS1 SMCHD1 CBX3P2 MYL12B DLGAP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CBX3P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CBX3P2 Gene

Genomic Locations for CBX3P2 Gene
3,226 bases
Minus strand

Genomic View for CBX3P2 Gene

Genes around CBX3P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CBX3P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CBX3P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CBX3P2 Gene

Proteins for CBX3P2 Gene

Post-translational modifications for CBX3P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CBX3P2 Gene

Domains & Families for CBX3P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CBX3P2 Gene

Function for CBX3P2 Gene

Phenotypes From GWAS Catalog for CBX3P2 Gene

Phenotypes for CBX3P2 Gene

GenomeRNAi human phenotypes for CBX3P2:
genes like me logo Genes that share phenotypes with CBX3P2: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CBX3P2 Gene

Localization for CBX3P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CBX3P2 Gene

Pathways & Interactions for CBX3P2 Gene

SuperPathways for CBX3P2 Gene

No Data Available

Interacting Proteins for CBX3P2 Gene

Gene Ontology (GO) - Biological Process for CBX3P2 Gene


No data available for Pathways by source and SIGNOR curated interactions for CBX3P2 Gene

Drugs & Compounds for CBX3P2 Gene

No Compound Related Data Available

Transcripts for CBX3P2 Gene

mRNA/cDNA for CBX3P2 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CBX3P2 Gene

No ASD Table

Relevant External Links for CBX3P2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CBX3P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CBX3P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of CBX3P2 Gene:


SOURCE GeneReport for Unigene cluster for CBX3P2 Gene:

genes like me logo Genes that share expression patterns with CBX3P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CBX3P2 Gene

Orthologs for CBX3P2 Gene

Evolution for CBX3P2 Gene

Gene Tree for CBX3P2 (if available)
Gene Tree for CBX3P2 (if available)

No data available for Orthologs for CBX3P2 Gene

Paralogs for CBX3P2 Gene

No data available for Paralogs for CBX3P2 Gene

Variants for CBX3P2 Gene

Sequence variations from dbSNP and Humsavar for CBX3P2 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs769401596 uncertain-significance, Facioscapulohumeral muscular dystrophy 2 2,656,090(-) C/A/T upstream_transcript_variant
rs139872818 uncertain-significance, not specified 2,656,225(-) C/G upstream_transcript_variant
rs559283578 uncertain-significance, not specified 2,656,115(-) G/A upstream_transcript_variant
rs748596758 uncertain-significance, not specified 2,656,130(-) G/C/T upstream_transcript_variant
rs766395572 uncertain-significance, not specified 2,656,237(-) G/A/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for CBX3P2 Gene

Variant ID Type Subtype PubMed ID
esv2761986 CNV gain 21179565
esv3893063 CNV loss 25118596
nsv1065848 CNV gain 25217958
nsv482935 CNV loss 15286789
nsv576251 CNV gain 21841781

Additional Variant Information for CBX3P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CBX3P2 Gene

Disorders for CBX3P2 Gene

Additional Disease Information for CBX3P2

No disorders were found for CBX3P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CBX3P2 Gene

Publications for CBX3P2 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for CBX3P2 Gene

Sources for CBX3P2 Gene

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