Aliases for CATIP-AS1 Gene

Data sources for CATIP-AS1 Gene:

RNA type for CATIP-AS1 Gene


Aliases for CATIP-AS1 Gene

External Ids for CATIP-AS1 Gene

Previous GeneCards Identifiers for CATIP-AS1 Gene

  • GC02M219232

Summaries for CATIP-AS1 Gene

GeneCards Summary for CATIP-AS1 Gene

CATIP-AS1 (CATIP Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with CATIP-AS1 include Retinitis Pigmentosa.

Additional gene information for CATIP-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CATIP-AS1 Gene

Genomics for CATIP-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CATIP-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CATIP-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CATIP-AS1 Gene

Latest Assembly
1,298 bases
Minus strand

Previous Assembly
(GRCh37/hg19 by Entrez Gene)
1,238 bases
Minus strand

(GRCh37/hg19 by Ensembl)
1,171 bases
Minus strand

Genomic View for CATIP-AS1 Gene

Genes around CATIP-AS1 on UCSC Golden Path with GeneCards custom track
CATIP-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
CATIP-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CATIP-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CATIP-AS1 Gene

Proteins for CATIP-AS1 Gene

Post-translational modifications for CATIP-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CATIP-AS1 Gene

Domains & Families for CATIP-AS1 Gene

Gene Families for CATIP-AS1 Gene

genes like me logo Genes that share domains with CATIP-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CATIP-AS1 Gene

Function for CATIP-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CATIP-AS1 Gene

Localization for CATIP-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CATIP-AS1 Gene

Pathways & Interactions for CATIP-AS1 Gene

PathCards logo

SuperPathways for CATIP-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CATIP-AS1 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CATIP-AS1 Gene

Drugs & Compounds for CATIP-AS1 Gene

No Compound Related Data Available

Transcripts for CATIP-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for CATIP-AS1 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000075D700_9606 lncRNA 547 3

RefSeq: NR_110573,

LncBook: HSALNT0047280,

LNCipedia: CATIP-AS1:1,

URS00009B732B_9606 lncRNA 480 3

Ensembl: ENST00000441749 (view in UCSC) ,

LNCipedia: CATIP-AS1:2,


URS00009C411D_9606 lncRNA 775 2

LncBook: HSALNT0047279,


URS0000D5924F_9606 lncRNA 637 2

LncBook: HSALNT0047277,

LNCipedia: CATIP-AS1:15,

URS0000D5DD01_9606 lncRNA 560 2

LncBook: HSALNT0047278,

LNCipedia: CATIP-AS1:13,

CATIP-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for CATIP-AS1 Gene

3 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CATIP-AS1 Gene

No ASD Table

Relevant External Links for CATIP-AS1 Gene

GeneLoc Exon Structure for

Expression for CATIP-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CATIP-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for CATIP-AS1 Gene

This gene is overexpressed in Whole Blood (x14.6).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for CATIP-AS1

genes like me logo Genes that share expression patterns with CATIP-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CATIP-AS1 Gene

Orthologs for CATIP-AS1 Gene

Evolution for CATIP-AS1 Gene

Gene Tree for CATIP-AS1 (if available)
Gene Tree for CATIP-AS1 (if available)
Alliance of Genome Resources:
Additional Orthologs for CATIP-AS1

No data available for Orthologs for CATIP-AS1 Gene

Paralogs for CATIP-AS1 Gene

No data available for Paralogs for CATIP-AS1 Gene

Variants for CATIP-AS1 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for CATIP-AS1 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for CATIP-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2763102 CNV loss 21179565
nsv519829 CNV loss 19592680

Additional Variant Information for CATIP-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
Leiden Open Variation Database (LOVD)

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for CATIP-AS1 Gene

Disorders for CATIP-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for CATIP-AS1 Gene - From: COP

Disorder Aliases PubMed IDs
retinitis pigmentosa
  • rp
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for CATIP-AS1

genes like me logo Genes that share disorders with CATIP-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for CATIP-AS1 Gene

Publications for CATIP-AS1 Gene

No publications were found for CATIP-AS1 Gene.

Products for CATIP-AS1 Gene

Sources for CATIP-AS1 Gene