Aliases for CASP1P2 Gene

Aliases for CASP1P2 Gene

  • Caspase 1 Pseudogene 2 2 3 5
  • Caspase 1, Apoptosis-Related Cysteine Peptidase Pseudogene 2 2 3
  • Caspase-1-Like 3
  • CASP1P2 5

External Ids for CASP1P2 Gene

Previous GeneCards Identifiers for CASP1P2 Gene

  • GC11M104937

Summaries for CASP1P2 Gene

GeneCards Summary for CASP1P2 Gene

CASP1P2 (Caspase 1 Pseudogene 2) is a Pseudogene.

Additional gene information for CASP1P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CASP1P2 Gene

Genomics for CASP1P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CASP1P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J105070 Promoter/Enhancer 0.5 Ensembl ENCODE 605.2 +0.4 447 1.8 CASP1P2 CARD17 ENSG00000288255 LOC107984381 CARD16 CASP1
GH11J105072 Promoter 0.3 Ensembl 600.7 -0.8 -760 0.2 CASP1P2 piR-38051-065 LOC107984381 CARD16 CASP1
GH11J105032 Promoter/Enhancer 1.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 4.3 +37.7 37740 4.8 REST IKZF2 POLR2A CEBPA CEBPB YY1 ZBTB33 JUND ELF1 IKZF1 CASP1 lnc-CARD16-1 CARD17 CASP4 CASP5 CARD16 CASP1P2 lnc-CASP5-2
GH11J105189 Enhancer 0.5 FANTOM5 Ensembl 4.2 -118.5 -118460 3.6 CEBPB CARD17 CASP5 CARD18 CASP4 CARD16 CASP1P2 lnc-CARD18-4 LOC105369469 lnc-CARD18-2
GH11J105155 Enhancer 0.5 Ensembl 4.1 -86.0 -85960 3.8 GATAD2A CEBPA SOX13 GATA3 NFIL3 HLF ZNF644 CASP4LP CARD17 CASP12 CARD18 CASP1P2 LOC105369469 HSALNG0086881 lnc-CARD18-2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CASP1P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CASP1P2 Gene

Genomic Locations for CASP1P2 Gene
chr11:105,062,602-105,071,541
(GRCh38/hg38)
Size:
8,940 bases
Orientation:
Minus strand
chr11:104,934,072-104,942,268
(GRCh37/hg19)
Size:
8,197 bases
Orientation:
Minus strand

Genomic View for CASP1P2 Gene

Genes around CASP1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CASP1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CASP1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CASP1P2 Gene

Proteins for CASP1P2 Gene

Post-translational modifications for CASP1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CASP1P2 Gene

Domains & Families for CASP1P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CASP1P2 Gene

Function for CASP1P2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CASP1P2 Gene

Localization for CASP1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CASP1P2 Gene

Pathways & Interactions for CASP1P2 Gene

PathCards logo

SuperPathways for CASP1P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CASP1P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CASP1P2 Gene

Drugs & Compounds for CASP1P2 Gene

No Compound Related Data Available

Transcripts for CASP1P2 Gene

mRNA/cDNA for CASP1P2 Gene

4 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for CASP1P2 Gene

No ASD Table

Relevant External Links for CASP1P2 Gene

GeneLoc Exon Structure for
CASP1P2

Expression for CASP1P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CASP1P2 Gene

mRNA differential expression in normal tissues according to GTEx for CASP1P2 Gene

This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (x12.4), Esophagus - Mucosa (x10.4), Skin - Sun Exposed (Lower leg) (x7.0), and Vagina (x5.8).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for CASP1P2

genes like me logo Genes that share expression patterns with CASP1P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CASP1P2 Gene

Orthologs for CASP1P2 Gene

Evolution for CASP1P2 Gene

ENSEMBL:
Gene Tree for CASP1P2 (if available)
TreeFam:
Gene Tree for CASP1P2 (if available)

No data available for Orthologs for CASP1P2 Gene

Paralogs for CASP1P2 Gene

No data available for Paralogs for CASP1P2 Gene

Variants for CASP1P2 Gene

Additional Variant Information for CASP1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CASP1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CASP1P2 Gene

Disorders for CASP1P2 Gene

Additional Disease Information for CASP1P2

No disorders were found for CASP1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CASP1P2 Gene

Publications for CASP1P2 Gene

  1. Association between genetic variants in VEGF, ERCC3 and occupational benzene haematotoxicity. (PMID: 19773279) Hosgood HD … Lan Q (Occupational and environmental medicine 2009) 3

Products for CASP1P2 Gene

Sources for CASP1P2 Gene