Aliases for CASP16P Gene

Aliases for CASP16P Gene

  • Caspase 16, Pseudogene 2 3 5
  • Caspase 16, Apoptosis-Related Cysteine Peptidase (Putative) 2 3
  • Caspase 16, Apoptosis-Related Cysteine Peptidase Pseudogene 3
  • Putative Caspase-14-Like Pseudogene 3
  • CASP16P 5
  • CASP16 3

External Ids for CASP16P Gene

Previous HGNC Symbols for CASP16P Gene

  • CASP16

Previous GeneCards Identifiers for CASP16P Gene

  • GC16P003175
  • GC16P003751
  • GC16P003836
  • GC16P003887
  • GC16P004063
  • GC16P003262
  • GC16P003303
  • GC16P003338
  • GC16P003392
  • GC16P003429
  • GC16P003471
  • GC16P003557
  • GC16P003604

Summaries for CASP16P Gene

GeneCards Summary for CASP16P Gene

CASP16P (Caspase 16, Pseudogene) is a Pseudogene.

Additional gene information for CASP16P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CASP16P Gene

Genomics for CASP16P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CASP16P Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CASP16P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CASP16P Gene

Genomic Locations for CASP16P Gene
chr16:3,144,015-3,149,963
(GRCh38/hg38)
Size:
5,949 bases
Orientation:
Plus strand
chr16:3,194,220-3,199,964
(GRCh37/hg19)
Size:
5,745 bases
Orientation:
Plus strand

Genomic View for CASP16P Gene

Genes around CASP16P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CASP16P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CASP16P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CASP16P Gene

Proteins for CASP16P Gene

Post-translational modifications for CASP16P Gene

No Post-translational modifications

No data available for DME Specific Peptides for CASP16P Gene

Domains & Families for CASP16P Gene

Gene Families for CASP16P Gene

HGNC:
genes like me logo Genes that share domains with CASP16P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CASP16P Gene

Function for CASP16P Gene

Phenotypes From GWAS Catalog for CASP16P Gene

Phenotypes for CASP16P Gene

genes like me logo Genes that share phenotypes with CASP16P: view

Animal Model Products

CRISPR Products

miRNA for CASP16P Gene

miRTarBase miRNAs that target CASP16P

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for CASP16P Gene

Localization for CASP16P Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for CASP16P gene
Compartment Confidence
cytosol 3
extracellular 2
mitochondrion 0
nucleus 0

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CASP16P Gene

Pathways & Interactions for CASP16P Gene

PathCards logo

SuperPathways for CASP16P Gene

No Data Available

Gene Ontology (GO) - Biological Process for CASP16P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CASP16P Gene

Drugs & Compounds for CASP16P Gene

No Compound Related Data Available

Transcripts for CASP16P Gene

mRNA/cDNA for CASP16P Gene

3 NCBI additional mRNA sequence :
4 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for CASP16P Gene

No ASD Table

Relevant External Links for CASP16P Gene

GeneLoc Exon Structure for
CASP16P

Expression for CASP16P Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for CASP16P

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CASP16P Gene

Orthologs for CASP16P Gene

This gene was present in the common ancestor of animals.

Orthologs for CASP16P Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia CASP16 30 31
  • 98.89 (n)
OneToOne
Dog
(Canis familiaris)
Mammalia CASP16 30 31
  • 80.6 (n)
OneToOne
Cow
(Bos Taurus)
Mammalia LOC788915 30
  • 79.2 (n)
CASP16 31
  • 44 (a)
OneToOne
Rat
(Rattus norvegicus)
Mammalia LOC680728 30
  • 74.95 (n)
Mouse
(Mus musculus)
Mammalia Casp16 30 17 31
  • 71.67 (n)
OneToOne
Oppossum
(Monodelphis domestica)
Mammalia CASP16 31
  • 22 (a)
OneToOne
Platypus
(Ornithorhynchus anatinus)
Mammalia CASP16 31
  • 20 (a)
OneToOne
Lizard
(Anolis carolinensis)
Reptilia -- 31
  • 15 (a)
ManyToMany
Zebrafish
(Danio rerio)
Actinopterygii CU467905.1 31
  • 12 (a)
ManyToMany
Fruit Fly
(Drosophila melanogaster)
Insecta Nc 31
  • 8 (a)
ManyToMany
Dredd 31
  • 5 (a)
ManyToMany
Species where no ortholog for CASP16P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)

Evolution for CASP16P Gene

ENSEMBL:
Gene Tree for CASP16P (if available)
TreeFam:
Gene Tree for CASP16P (if available)

Paralogs for CASP16P Gene

No data available for Paralogs for CASP16P Gene

Variants for CASP16P Gene

Variation tolerance for CASP16P Gene

Gene Damage Index Score: 1.67; 31.93% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for CASP16P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CASP16P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Structural Variations from Database of Genomic Variants (DGV) for CASP16P Gene

Disorders for CASP16P Gene

Additional Disease Information for CASP16P

No disorders were found for CASP16P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CASP16P Gene

Publications for CASP16P Gene

  1. Identification of novel mammalian caspases reveals an important role of gene loss in shaping the human caspase repertoire. (PMID: 18281271) Eckhart L … Tschachler E (Molecular biology and evolution 2008) 2 3
  2. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J … Pennacchio LA (Nature 2004) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for CASP16P Gene

Sources for CASP16P Gene