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Aliases for CASK-AS1 Gene

Subcategory (RNA class) for CASK-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CASK-AS1 Gene

  • CASK Antisense RNA 1 2 3 5
  • CASK Antisense RNA 1 (Non-Protein Coding) 2

External Ids for CASK-AS1 Gene

Previous GeneCards Identifiers for CASK-AS1 Gene

  • GC00U933152
  • GC0XP041380

Summaries for CASK-AS1 Gene

GeneCards Summary for CASK-AS1 Gene

CASK-AS1 (CASK Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for CASK-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CASK-AS1 Gene

Genomics for CASK-AS1 Gene

GeneHancer (GH) Regulatory Elements for CASK-AS1 Gene

Promoters and enhancers for CASK-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI041519 Enhancer 0.4 UCNEbase 550.8 +0.1 121 0.3 CASK-AS1 GC0XM041571 RNU6-1321P CASK
GH0XI041329 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 45.1 -186.3 -186330 7.8 CLOCK FEZF1 DMAP1 YBX1 IRF4 YY1 ZNF213 E2F8 ZNF143 SP3 DDX3X CASK-AS1 CXorf38 MED14 USP9X NYX PIR48586
GH0XI041083 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 38.2 -433.5 -433512 6.1 MLX FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 ZNF548 SP3 USP9X CASK-AS1 BCOR DDX3X MED14 CXorf38 GC0XP041123
GH0XI040727 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE 22.2 -787.8 -787798 10.2 HDGF PKNOX1 SMAD1 ARID4B SIN3A DMAP1 ZNF2 IRF4 YY1 POLR2B MED14 CXorf38 CASK-AS1 MED14OS DDX3X BCOR USP9X
GH0XI040570 Enhancer 1.3 FANTOM5 Ensembl ENCODE 13.1 -949.0 -949035 1.6 PKNOX1 ATF1 ZBTB40 ZNF766 EGR1 ATF7 ETV6 IKZF2 RUNX3 CAVIN1 CASK-AS1 BCOR ATP6AP2 CXorf38 MED14 RNU7-164P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CASK-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CASK-AS1 Gene

Genomic Locations for CASK-AS1 Gene
chrX:41,520,036-41,522,336
(GRCh38/hg38)
Size:
2,301 bases
Orientation:
Plus strand
chrX:41,379,289-41,381,589
(GRCh37/hg19)

Genomic View for CASK-AS1 Gene

Genes around CASK-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CASK-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CASK-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for CASK-AS1 Gene

Proteins for CASK-AS1 Gene

Post-translational modifications for CASK-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CASK-AS1 Gene

Domains & Families for CASK-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CASK-AS1 Gene

Function for CASK-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CASK-AS1 Gene

Localization for CASK-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CASK-AS1 Gene

Pathways & Interactions for CASK-AS1 Gene

SuperPathways for CASK-AS1 Gene

No Data Available

Interacting Proteins for CASK-AS1 Gene

Gene Ontology (GO) - Biological Process for CASK-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CASK-AS1 Gene

Drugs & Compounds for CASK-AS1 Gene

No Compound Related Data Available

Transcripts for CASK-AS1 Gene

mRNA/cDNA for CASK-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CASK-AS1 Gene

No ASD Table

Relevant External Links for CASK-AS1 Gene

GeneLoc Exon Structure for
CASK-AS1
ECgene alternative splicing isoforms for
CASK-AS1

Expression for CASK-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CASK-AS1 Gene

genes like me logo Genes that share expression patterns with CASK-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CASK-AS1 Gene

Orthologs for CASK-AS1 Gene

Evolution for CASK-AS1 Gene

ENSEMBL:
Gene Tree for CASK-AS1 (if available)
TreeFam:
Gene Tree for CASK-AS1 (if available)

No data available for Orthologs for CASK-AS1 Gene

Paralogs for CASK-AS1 Gene

No data available for Paralogs for CASK-AS1 Gene

Variants for CASK-AS1 Gene

Additional Variant Information for CASK-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CASK-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CASK-AS1 Gene

Disorders for CASK-AS1 Gene

No disorders were found for CASK-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CASK-AS1 Gene

Publications for CASK-AS1 Gene

No publications were found for CASK-AS1 Gene.

Products for CASK-AS1 Gene

Sources for CASK-AS1 Gene

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