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Aliases for CARSP1 Gene

Aliases for CARSP1 Gene

  • Cysteinyl-TRNA Synthetase Pseudogene 1 2 3 5

External Ids for CARSP1 Gene

Summaries for CARSP1 Gene

GeneCards Summary for CARSP1 Gene

CARSP1 (Cysteinyl-TRNA Synthetase Pseudogene 1) is a Pseudogene.

Additional gene information for CARSP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CARSP1 Gene

Genomics for CARSP1 Gene

GeneHancer (GH) Regulatory Elements for CARSP1 Gene

Promoters and enhancers for CARSP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J068749 Enhancer 0.4 ENCODE 650.7 +0.5 516 0.2 FOXP2 RCOR1 CARSP1 ANP32A MIR4312
GH15J068786 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +43.5 43453 12.1 HDGF PKNOX1 GLI4 ZNF2 IRF4 YY1 ZNF213 ZNF207 ZNF143 ATF7 ANP32A CORO2B PIAS1 MIR4312 CARSP1
GH15J068780 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 +32.9 32885 3.2 CTCF RAD21 YY1 POLR2A SCRT2 ZNF143 SMC3 ZNF444 BCLAF1 EGR2 ANP32A PIAS1 MIR4312 CARSP1
GH15J068754 Enhancer 0.7 Ensembl ENCODE 0.4 +5.5 5500 1.2 CTCF JUN NFE2 ELF1 NR2F2 GABPA ANP32A CARSP1 MIR4312
GH15J068777 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.3 +26.5 26541 1.5 PAF1 POLR2A NR2F2 ANP32A SPESP1 ENSG00000137808 NOX5 CARSP1 MIR4312
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CARSP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CARSP1 Gene

Genomic Locations for CARSP1 Gene
chr15:68,749,501-68,750,691
(GRCh38/hg38)
Size:
1,191 bases
Orientation:
Plus strand
chr15:69,041,840-69,043,030
(GRCh37/hg19)

Genomic View for CARSP1 Gene

Genes around CARSP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CARSP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CARSP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CARSP1 Gene

Function for CARSP1 Gene

Phenotypes From GWAS Catalog for CARSP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CARSP1 Gene

Localization for CARSP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CARSP1 Gene

Pathways & Interactions for CARSP1 Gene

SuperPathways for CARSP1 Gene

No Data Available

Interacting Proteins for CARSP1 Gene

Gene Ontology (GO) - Biological Process for CARSP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CARSP1 Gene

Drugs & Compounds for CARSP1 Gene

No Compound Related Data Available

Transcripts for CARSP1 Gene

mRNA/cDNA for CARSP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CARSP1 Gene

No ASD Table

Relevant External Links for CARSP1 Gene

GeneLoc Exon Structure for
CARSP1
ECgene alternative splicing isoforms for
CARSP1

Expression for CARSP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CARSP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of CARSP1 Gene:

CARSP1
genes like me logo Genes that share expression patterns with CARSP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CARSP1 Gene

Orthologs for CARSP1 Gene

Evolution for CARSP1 Gene

ENSEMBL:
Gene Tree for CARSP1 (if available)
TreeFam:
Gene Tree for CARSP1 (if available)

No data available for Orthologs for CARSP1 Gene

Paralogs for CARSP1 Gene

No data available for Paralogs for CARSP1 Gene

Variants for CARSP1 Gene

Additional Variant Information for CARSP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CARSP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CARSP1 Gene

Disorders for CARSP1 Gene

No disorders were found for CARSP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CARSP1 Gene

Publications for CARSP1 Gene

No publications were found for CARSP1 Gene.

Products for CARSP1 Gene

Sources for CARSP1 Gene

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