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CARHSP1 (Calcium Regulated Heat Stable Protein 1) is a Protein Coding gene. Diseases associated with CARHSP1 include Thrombocytopenia-Absent Radius Syndrome. Gene Ontology (GO) annotations related to this gene include nucleic acid binding and mRNA 3'-UTR binding. An important paralog of this gene is CSDC2.
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0003676 | nucleic acid binding | IEA | -- |
GO:0003723 | RNA binding | IEA | -- |
GO:0003730 | mRNA 3'-UTR binding | IDA | 21078874 |
GO:0005515 | protein binding | IPI | 25416956 |
GO:0019902 | phosphatase binding | NAS | 12801884 |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0000177 | colocalizes_with cytoplasmic exosome (RNase complex) | ISS | -- |
GO:0000932 | P-body | IEA | -- |
GO:0005737 | cytoplasm | IBA | 21873635 |
GO:0005829 | cytosol | ISS | -- |
GO:0043186 | P granule | ISS | -- |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0035556 | intracellular signal transduction | TAS | 9712905 |
GO:0043488 | regulation of mRNA stability | IBA,ISS | -- |
ExUns: | 1 | ^ | 2 | ^ | 3a | · | 3b | · | 3c | ^ | 4 | ^ | 5 | ^ | 6a | · | 6b | · | 6c | · | 6d | ^ | 7a | · | 7b | ^ | 8a | · | 8b | · | 8c | ^ | 9a | · | 9b | · | 9c | ^ | 10a | · | 10b | · | 10c | · | 10d | · | 10e |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SP1: | - | - | - | - | - | - | - | - | - | - | - | - | - | ||||||||||||||||||||||||||||||||||
SP2: | - | - | - | - | |||||||||||||||||||||||||||||||||||||||||||
SP3: | - | - | - | - | - | ||||||||||||||||||||||||||||||||||||||||||
SP4: | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |||||||||||||||||||||||||||||||||
SP5: | - | - | - | - | - | - | - | - | - | - | - | ||||||||||||||||||||||||||||||||||||
SP6: | - | - | - | - | - | - | - | - | - | - | |||||||||||||||||||||||||||||||||||||
SP7: | - | - | - | - | - | - | - | - | - | ||||||||||||||||||||||||||||||||||||||
SP8: | - | - | - | - | - | - | - | - | |||||||||||||||||||||||||||||||||||||||
SP9: | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |||||||||||||||||||||||||||||||
SP10: | - | ||||||||||||||||||||||||||||||||||||||||||||||
SP11: | - | - | - | - | - | - | - | - | - | ||||||||||||||||||||||||||||||||||||||
SP12: | |||||||||||||||||||||||||||||||||||||||||||||||
SP13: | - | - | - | - | - | - | - | - |
This gene was present in the common ancestor of animals.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
Chimpanzee (Pan troglodytes) |
Mammalia | CARHSP1 30 31 |
|
OneToOne | |
Mouse (Mus musculus) |
Mammalia | Gm9791 31 |
|
OneToMany | |
Carhsp1 30 17 31 |
|
OneToMany | |||
Dog (Canis familiaris) |
Mammalia | CARHSP1 30 31 |
|
OneToOne | |
Rat (Rattus norvegicus) |
Mammalia | Carhsp1 30 |
|
||
Cow (Bos Taurus) |
Mammalia | CARHSP1 30 31 |
|
OneToOne | |
Oppossum (Monodelphis domestica) |
Mammalia | -- 31 |
|
OneToMany | |
-- 31 |
|
OneToMany | |||
Platypus (Ornithorhynchus anatinus) |
Mammalia | CARHSP1 31 |
|
OneToOne | |
Chicken (Gallus gallus) |
Aves | CARHSP1 30 31 |
|
OneToOne | |
Lizard (Anolis carolinensis) |
Reptilia | CARHSP1 31 |
|
OneToOne | |
Tropical Clawed Frog (Silurana tropicalis) |
Amphibia | carhsp1 30 |
|
||
Str.15423 30 |
|
||||
African clawed frog (Xenopus laevis) |
Amphibia | carhsp1-prov 30 |
|
||
Zebrafish (Danio rerio) |
Actinopterygii | carhsp1 30 31 |
|
OneToOne | |
zgc65920 30 |
|
||||
Rainbow Trout (Oncorhynchus mykiss) |
Actinopterygii | Omy.10912 30 |
|
||
African malaria mosquito (Anopheles gambiae) |
Insecta | AgaP_AGAP005641 30 |
|
||
Fruit Fly (Drosophila melanogaster) |
Insecta | CG9705 30 31 |
|
OneToMany |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
dgv341n27 | CNV | gain | 19166990 |
dgv4906n54 | CNV | gain | 21841781 |
esv27013 | CNV | gain | 19812545 |
esv2763129 | CNV | gain | 21179565 |
nsv1036523 | CNV | gain | 25217958 |
nsv1043528 | CNV | gain | 25217958 |
nsv457394 | CNV | gain | 19166990 |
nsv521109 | CNV | loss | 19592680 |
nsv571424 | CNV | gain | 21841781 |
nsv571428 | CNV | gain | 21841781 |
nsv833135 | CNV | loss | 17160897 |
nsv952916 | CNV | deletion | 24416366 |
Disorder | Aliases | PubMed IDs |
---|---|---|
thrombocytopenia-absent radius syndrome |
|
|