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Aliases for CARD8-AS1 Gene

Subcategory (RNA class) for CARD8-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CARD8-AS1 Gene

  • CARD8 Antisense RNA 1 2 3 5

External Ids for CARD8-AS1 Gene

Summaries for CARD8-AS1 Gene

GeneCards Summary for CARD8-AS1 Gene

CARD8-AS1 (CARD8 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for CARD8-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CARD8-AS1 Gene

Genomics for CARD8-AS1 Gene

GeneHancer (GH) Regulatory Elements for CARD8-AS1 Gene

Promoters and enhancers for CARD8-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I048253 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 577.5 +1.8 1777 7.1 CLOCK MLX DMAP1 IRF4 YY1 SLC30A9 E2F8 ZNF143 SP3 MEF2D CARD8-AS1 CARD8 BICRA KDELR1 GRWD1 SNRNP70 NOP53-AS1 NOP53 RPL18 SNORD23
GH19I048247 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 27.3 -5.7 -5684 4.1 HDGF PKNOX1 SMAD1 YY1 ZNF207 ZNF143 ATF7 RUNX3 CAVIN1 JUNB GC19M048250 VN1R97P PIR59935 CARD8 CARD8-AS1 GRWD1 NOP53-AS1 BICRA SNRNP70 RASIP1
GH19I048319 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 6.4 +68.3 68267 8.2 FEZF1 YBX1 IRF4 YY1 ZNF213 E2F8 ZNF143 ZNF263 SP3 MEF2D CCDC114 EMP3 KDELR1 SNORD23 NOP53 RPL18 BICRA GRWD1 NOP53-AS1 TMEM143
GH19I048269 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE 5 +15.1 15081 3 MLX ARID4B SIN3A DMAP1 ZNF2 ZNF48 ZNF121 ZNF143 RUNX3 SP5 ZNF114 LOC105372429 CCDC114 CARD8-AS1 TMEM143
GH19I048252 Enhancer 0.5 dbSUPER 21.3 -2.5 -2543 0.7 SMARCE1 NCOR1 SMARCA4 ZNF184 ADNP MLLT1 DPF2 VN1R97P CARD8-AS1 PLA2G4C CARD8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CARD8-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CARD8-AS1 Gene

Genomic Locations for CARD8-AS1 Gene
chr19:48,255,675-48,258,199
(GRCh38/hg38)
Size:
2,525 bases
Orientation:
Plus strand
chr19:48,758,932-48,761,456
(GRCh37/hg19)

Genomic View for CARD8-AS1 Gene

Genes around CARD8-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CARD8-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CARD8-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CARD8-AS1 Gene

Proteins for CARD8-AS1 Gene

Post-translational modifications for CARD8-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CARD8-AS1 Gene

Domains & Families for CARD8-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CARD8-AS1 Gene

Function for CARD8-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CARD8-AS1 Gene

Localization for CARD8-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CARD8-AS1 Gene

Pathways & Interactions for CARD8-AS1 Gene

SuperPathways for CARD8-AS1 Gene

No Data Available

Interacting Proteins for CARD8-AS1 Gene

Gene Ontology (GO) - Biological Process for CARD8-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CARD8-AS1 Gene

Drugs & Compounds for CARD8-AS1 Gene

No Compound Related Data Available

Transcripts for CARD8-AS1 Gene

mRNA/cDNA for CARD8-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CARD8-AS1 Gene

No ASD Table

Relevant External Links for CARD8-AS1 Gene

GeneLoc Exon Structure for
CARD8-AS1
ECgene alternative splicing isoforms for
CARD8-AS1

Expression for CARD8-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CARD8-AS1 Gene

genes like me logo Genes that share expression patterns with CARD8-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CARD8-AS1 Gene

Orthologs for CARD8-AS1 Gene

Evolution for CARD8-AS1 Gene

ENSEMBL:
Gene Tree for CARD8-AS1 (if available)
TreeFam:
Gene Tree for CARD8-AS1 (if available)

No data available for Orthologs for CARD8-AS1 Gene

Paralogs for CARD8-AS1 Gene

No data available for Paralogs for CARD8-AS1 Gene

Variants for CARD8-AS1 Gene

Sequence variations from dbSNP and Humsavar for CARD8-AS1 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000576173 -- 48,257,957(+) G/C non_coding_transcript_variant
rs1002527839 -- 48,255,287(+) A/G upstream_transcript_variant
rs1002819439 -- 48,258,129(+) G/A non_coding_transcript_variant
rs1003101860 -- 48,257,843(+) T/C non_coding_transcript_variant
rs1003154439 -- 48,256,595(+) C/T non_coding_transcript_variant

Additional Variant Information for CARD8-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CARD8-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CARD8-AS1 Gene

Disorders for CARD8-AS1 Gene

Additional Disease Information for CARD8-AS1

No disorders were found for CARD8-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CARD8-AS1 Gene

Publications for CARD8-AS1 Gene

  1. Co-expression Network Analysis of Human lncRNAs and Cancer Genes. (PMID: 25392693) Cogill SB … Wang L (Cancer informatics 2014) 2 3 58
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for CARD8-AS1 Gene

Sources for CARD8-AS1 Gene

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