Aliases for CARD11-AS1 Gene

Subcategory (RNA class) for CARD11-AS1 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for CARD11-AS1 Gene

  • CARD11 Antisense RNA 1 2 3 5
  • CARD11-AS1 2 5
  • NONHSAG046811.2 91
  • HSALNG0055770 164

External Ids for CARD11-AS1 Gene

Summaries for CARD11-AS1 Gene

GeneCards Summary for CARD11-AS1 Gene

CARD11-AS1 (CARD11 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with CARD11-AS1 include B-Cell Expansion With Nfkb And T-Cell Anergy and Immunodeficiency 11.

Additional gene information for CARD11-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CARD11-AS1 Gene

Genomics for CARD11-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CARD11-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CARD11-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CARD11-AS1 Gene

Genomic Locations for CARD11-AS1 Gene
chr7:2,944,024-2,947,092
(GRCh38/hg38)
Size:
3,069 bases
Orientation:
Plus strand
chr7:2,983,669-2,986,725
(GRCh37/hg19)
Size:
3,057 bases
Orientation:
Plus strand

Genomic View for CARD11-AS1 Gene

Genes around CARD11-AS1 on UCSC Golden Path with GeneCards custom track
CARD11-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
CARD11-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CARD11-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CARD11-AS1 Gene

Proteins for CARD11-AS1 Gene

Post-translational modifications for CARD11-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CARD11-AS1 Gene

Domains & Families for CARD11-AS1 Gene

Gene Families for CARD11-AS1 Gene

genes like me logo Genes that share domains with CARD11-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CARD11-AS1 Gene

Function for CARD11-AS1 Gene

Phenotypes From GWAS Catalog for CARD11-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CARD11-AS1 Gene

Localization for CARD11-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CARD11-AS1 Gene

Pathways & Interactions for CARD11-AS1 Gene

PathCards logo

SuperPathways for CARD11-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CARD11-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CARD11-AS1 Gene

Drugs & Compounds for CARD11-AS1 Gene

No Compound Related Data Available

Transcripts for CARD11-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for CARD11-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000271FCA_9606 lncRNA 969 4

HGNC: 40766,

Ensembl: ENST00000423194 (view in UCSC) ,

LncBook: HSALNT0118016,

NONCODE: NONHSAT118831.2,

URS00009AF3A7_9606 lncRNA 969 2

LncBook: HSALNT0118017,

NONCODE: NONHSAT211577.1,

URS00008B60BC_9606 lncRNA 612 2

LncBook: HSALNT0118015,

NONCODE: NONHSAT118830.2,

CARD11-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for CARD11-AS1 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for CARD11-AS1 Gene

No ASD Table

Relevant External Links for CARD11-AS1 Gene

GeneLoc Exon Structure for
CARD11-AS1

Expression for CARD11-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for CARD11-AS1

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CARD11-AS1 Gene

Orthologs for CARD11-AS1 Gene

Evolution for CARD11-AS1 Gene

ENSEMBL:
Gene Tree for CARD11-AS1 (if available)
TreeFam:
Gene Tree for CARD11-AS1 (if available)

No data available for Orthologs for CARD11-AS1 Gene

Paralogs for CARD11-AS1 Gene

No data available for Paralogs for CARD11-AS1 Gene

Variants for CARD11-AS1 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for CARD11-AS1 Gene

SNP ID Clinical significance and condition Chr 07 pos Variation AA Info Type
758483 Likely Benign: not provided 2,945,961(+) G/A INTRON_VARIANT
761075 Likely Benign: not provided 2,945,811(+) G/A INTRON_VARIANT
871388 Likely Pathogenic: not provided 2,945,938(+) A/G MISSENSE_VARIANT
rs10229368 Benign: Immunodeficiency 11; B-cell expansion with NFKB and T-cell anergy 2,945,952(+) C/G SYNONYMOUS_VARIANT
rs1064795280 Conflicting Interpretations: not specified; not provided 2,945,953(+) C/T MISSENSE_VARIANT

Additional dbSNP identifiers (rs#s) for CARD11-AS1 Gene

Additional Variant Information for CARD11-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CARD11-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CARD11-AS1 Gene

Disorders for CARD11-AS1 Gene

MalaCards: The human disease database

(2) MalaCards diseases for CARD11-AS1 Gene - From: GeneCards

Disorder Aliases PubMed IDs
b-cell expansion with nfkb and t-cell anergy
  • persistent polyclonal b-cell lymphocytosis
immunodeficiency 11
  • imd11a
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for CARD11-AS1

genes like me logo Genes that share disorders with CARD11-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for CARD11-AS1 Gene

Publications for CARD11-AS1 Gene

No publications were found for CARD11-AS1 Gene.

No data available for Mastermind for CARD11-AS1 Gene

Products for CARD11-AS1 Gene

Sources for CARD11-AS1 Gene