Aliases for CAPNS1P1 Gene

Aliases for CAPNS1P1 Gene

  • Calpain Small Subunit 1 Pseudogene 1 2 3 5
  • CAPNS1P1 5

External Ids for CAPNS1P1 Gene

Previous GeneCards Identifiers for CAPNS1P1 Gene

  • GC01P089861

Summaries for CAPNS1P1 Gene

GeneCards Summary for CAPNS1P1 Gene

CAPNS1P1 (Calpain Small Subunit 1 Pseudogene 1) is a Pseudogene.

Additional gene information for CAPNS1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CAPNS1P1 Gene

Genomics for CAPNS1P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CAPNS1P1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J089365 Enhancer 0.6 Ensembl ENCODE CraniofacialAtlas 0.3 -28.9 -28871 1 ZBTB40 GBP6 LRRC8B CAPNS1P1
GH01J089379 Enhancer 0.2 Ensembl 0.4 -15.9 -15920 0.2 GBP7 GBP6 CAPNS1P1 LRRC8B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CAPNS1P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CAPNS1P1 Gene

Latest Assembly
645 bases
Plus strand

Previous Assembly
(GRCh37/hg19 by Entrez Gene)
640 bases
Plus strand

(GRCh37/hg19 by Ensembl)
633 bases
Plus strand

Genomic View for CAPNS1P1 Gene

Genes around CAPNS1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CAPNS1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CAPNS1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CAPNS1P1 Gene

Proteins for CAPNS1P1 Gene

Post-translational modifications for CAPNS1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CAPNS1P1 Gene

Domains & Families for CAPNS1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CAPNS1P1 Gene

Function for CAPNS1P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CAPNS1P1 Gene

Localization for CAPNS1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CAPNS1P1 Gene

Pathways & Interactions for CAPNS1P1 Gene

PathCards logo

SuperPathways for CAPNS1P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CAPNS1P1 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CAPNS1P1 Gene

Drugs & Compounds for CAPNS1P1 Gene

No Compound Related Data Available

Transcripts for CAPNS1P1 Gene

mRNA/cDNA for CAPNS1P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CAPNS1P1 Gene

No ASD Table

Relevant External Links for CAPNS1P1 Gene

GeneLoc Exon Structure for

Expression for CAPNS1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CAPNS1P1 Gene

mRNA differential expression in normal tissues according to GTEx for CAPNS1P1 Gene

This gene is overexpressed in Esophagus - Mucosa (x25.1) and Minor Salivary Gland (x4.3).
genes like me logo Genes that share expression patterns with CAPNS1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CAPNS1P1 Gene

Orthologs for CAPNS1P1 Gene

Evolution for CAPNS1P1 Gene

Gene Tree for CAPNS1P1 (if available)
Gene Tree for CAPNS1P1 (if available)

No data available for Orthologs for CAPNS1P1 Gene

Paralogs for CAPNS1P1 Gene

No data available for Paralogs for CAPNS1P1 Gene

Variants for CAPNS1P1 Gene

Additional Variant Information for CAPNS1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CAPNS1P1 Gene

Disorders for CAPNS1P1 Gene

No disorders were found for CAPNS1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CAPNS1P1 Gene

Publications for CAPNS1P1 Gene

No publications were found for CAPNS1P1 Gene.

No data available for Mastermind for CAPNS1P1 Gene

Products for CAPNS1P1 Gene

Sources for CAPNS1P1 Gene