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Aliases for CAMTA1-IT1 Gene

Subcategory (RNA class) for CAMTA1-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CAMTA1-IT1 Gene

  • CAMTA1 Intronic Transcript 1 2 3 5
  • CAMTA1 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for CAMTA1-IT1 Gene

Previous GeneCards Identifiers for CAMTA1-IT1 Gene

  • GC00U933967

Summaries for CAMTA1-IT1 Gene

GeneCards Summary for CAMTA1-IT1 Gene

CAMTA1-IT1 (CAMTA1 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for CAMTA1-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CAMTA1-IT1 Gene

Genomics for CAMTA1-IT1 Gene

GeneHancer (GH) Regulatory Elements for CAMTA1-IT1 Gene

Promoters and enhancers for CAMTA1-IT1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I007378 Enhancer 0.9 Ensembl ENCODE 0.4 +11.1 11133 2.2 MXI1 JUN MAX SCRT2 SMC3 RCOR1 CHD2 TCF7L2 GFI1B USF2 LOC102725193 CAMTA1-IT1 CAMTA1
GH01I007297 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -68.6 -68595 5.8 PKNOX1 FEZF1 BRCA1 GLIS2 FOS REST TSHZ1 SMARCB1 ZNF518A GLIS1 PER3 THAP3 NOL9 LOC101928836 GC01M007245 CAMTA1-IT1 CAMTA1
GH01I007333 Enhancer 1 Ensembl ENCODE 0.3 -34.0 -34036 1.5 PKNOX1 ZSCAN4 INSM2 BRCA1 ZNF366 SMARCC2 RCOR1 ZNF680 SMARCC1 CEBPB LOC102725193 CAMTA1-IT1 GC01M007245 CAMTA1
GH01I007388 Enhancer 0.7 Ensembl ENCODE 0.3 +20.3 20309 1.8 ZFHX2 RFX1 PRDM10 BMI1 ZIC2 EGR2 LOC102725193 CAMTA1-IT1 CAMTA1
GH01I007335 Enhancer 0.5 ENCODE 0.3 -33.1 -33054 0.2 SP1 GATA3 RCOR1 TCF7L2 CAMTA1-IT1 GC01M007245 CAMTA1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CAMTA1-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CAMTA1-IT1 Gene

Genomic Locations for CAMTA1-IT1 Gene
chr1:7,368,790-7,370,270
(GRCh38/hg38)
Size:
1,481 bases
Orientation:
Plus strand
chr1:7,429,003-7,430,331
(GRCh37/hg19)

Genomic View for CAMTA1-IT1 Gene

Genes around CAMTA1-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CAMTA1-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CAMTA1-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for CAMTA1-IT1 Gene

Proteins for CAMTA1-IT1 Gene

Post-translational modifications for CAMTA1-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CAMTA1-IT1 Gene

Domains & Families for CAMTA1-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CAMTA1-IT1 Gene

Function for CAMTA1-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CAMTA1-IT1 Gene

Localization for CAMTA1-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CAMTA1-IT1 Gene

Pathways & Interactions for CAMTA1-IT1 Gene

SuperPathways for CAMTA1-IT1 Gene

No Data Available

Interacting Proteins for CAMTA1-IT1 Gene

Gene Ontology (GO) - Biological Process for CAMTA1-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CAMTA1-IT1 Gene

Drugs & Compounds for CAMTA1-IT1 Gene

No Compound Related Data Available

Transcripts for CAMTA1-IT1 Gene

mRNA/cDNA for CAMTA1-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CAMTA1-IT1 Gene

No ASD Table

Relevant External Links for CAMTA1-IT1 Gene

GeneLoc Exon Structure for
CAMTA1-IT1
ECgene alternative splicing isoforms for
CAMTA1-IT1

Expression for CAMTA1-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CAMTA1-IT1 Gene

mRNA differential expression in normal tissues according to GTEx for CAMTA1-IT1 Gene

This gene is overexpressed in Testis (x14.6).
genes like me logo Genes that share expression patterns with CAMTA1-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CAMTA1-IT1 Gene

Orthologs for CAMTA1-IT1 Gene

Evolution for CAMTA1-IT1 Gene

ENSEMBL:
Gene Tree for CAMTA1-IT1 (if available)
TreeFam:
Gene Tree for CAMTA1-IT1 (if available)

No data available for Orthologs for CAMTA1-IT1 Gene

Paralogs for CAMTA1-IT1 Gene

No data available for Paralogs for CAMTA1-IT1 Gene

Variants for CAMTA1-IT1 Gene

Additional Variant Information for CAMTA1-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CAMTA1-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CAMTA1-IT1 Gene

Disorders for CAMTA1-IT1 Gene

No disorders were found for CAMTA1-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CAMTA1-IT1 Gene

Publications for CAMTA1-IT1 Gene

No publications were found for CAMTA1-IT1 Gene.

Products for CAMTA1-IT1 Gene

Sources for CAMTA1-IT1 Gene

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