Aliases for CAMTA1-AS1 Gene

Subcategory (RNA class) for CAMTA1-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for CAMTA1-AS1 Gene

  • CAMTA1 Antisense RNA 1 2 3
  • NONHSAG000263 92
  • HSALNG0000562 167
  • Lnc-UTS2-2 168
  • CAMTA1-AS1 2

External Ids for CAMTA1-AS1 Gene

Summaries for CAMTA1-AS1 Gene

GeneCards Summary for CAMTA1-AS1 Gene

CAMTA1-AS1 (CAMTA1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for CAMTA1-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CAMTA1-AS1 Gene

Genomics for CAMTA1-AS1 Gene

GeneHancer (GH) Regulatory Elements for CAMTA1-AS1 Gene

Promoters and enhancers for CAMTA1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J007468 Enhancer 1.4 FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.3 -29.6 -29614 5.2 TCF12 JUND FOS EP300 CREB1 NFIC ZNF592 ZBTB17 SMARCC1 SMARCC2 ENSG00000225126 PARK7 lnc-UTS2-11 CAMTA1-AS1 CAMTA1
GH01J007477 Enhancer 1.3 FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.3 -36.8 -36779 3.7 FOS ZEB1 MXI1 ZNF341 NR2F2 TCF12 CEBPB ZFHX2 GLI4 SUZ12 ENSG00000225126 ENSG00000237365 lnc-UTS2-11 CAMTA1-AS1 CAMTA1
GH01J007454 Enhancer 0.8 Ensembl CraniofacialAtlas 0.4 -14.2 -14208 3.6 CTCF WT1 NFIC ZNF263 RAD21 MAFK POLR2A ELF1 SMC3 ZNF398 CAMTA1-AS1 lnc-UTS2-11 CAMTA1
GH01J007482 Enhancer 0.3 Ensembl CraniofacialAtlas 0.3 -41.3 -41309 1.4 ENSG00000225126 ENSG00000237365 lnc-UTS2-11 CAMTA1-AS1 CAMTA1
GH01J007452 Enhancer 0.2 CraniofacialAtlas 0.4 -11.2 -11249 0.6 CAMTA1-AS1 lnc-UTS2-11 CAMTA1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CAMTA1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CAMTA1-AS1 Gene

Genomic Locations for CAMTA1-AS1 Gene
chr1:7,440,567-7,441,592
(GRCh38/hg38)
Size:
1,026 bases
Orientation:
Minus strand

Genomic View for CAMTA1-AS1 Gene

Genes around CAMTA1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CAMTA1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CAMTA1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CAMTA1-AS1 Gene

Proteins for CAMTA1-AS1 Gene

Post-translational modifications for CAMTA1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CAMTA1-AS1 Gene

Domains & Families for CAMTA1-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CAMTA1-AS1 Gene

Function for CAMTA1-AS1 Gene

Phenotypes From GWAS Catalog for CAMTA1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CAMTA1-AS1 Gene

Localization for CAMTA1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CAMTA1-AS1 Gene

Pathways & Interactions for CAMTA1-AS1 Gene

PathCards logo

SuperPathways for CAMTA1-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for CAMTA1-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CAMTA1-AS1 Gene

Drugs & Compounds for CAMTA1-AS1 Gene

No Compound Related Data Available

Transcripts for CAMTA1-AS1 Gene

mRNA/cDNA for CAMTA1-AS1 Gene

3 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
3 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for CAMTA1-AS1 Gene

No ASD Table

Relevant External Links for CAMTA1-AS1 Gene

GeneLoc Exon Structure for
CAMTA1-AS1

Expression for CAMTA1-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for CAMTA1-AS1

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CAMTA1-AS1 Gene

Orthologs for CAMTA1-AS1 Gene

No data available for Orthologs and Evolution for CAMTA1-AS1 Gene

Paralogs for CAMTA1-AS1 Gene

No data available for Paralogs for CAMTA1-AS1 Gene

Variants for CAMTA1-AS1 Gene

Additional dbSNP identifiers (rs#s) for CAMTA1-AS1 Gene

Additional Variant Information for CAMTA1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CAMTA1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CAMTA1-AS1 Gene

Disorders for CAMTA1-AS1 Gene

No disorders were found for CAMTA1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CAMTA1-AS1 Gene

Publications for CAMTA1-AS1 Gene

No publications were found for CAMTA1-AS1 Gene.

No data available for Mastermind for CAMTA1-AS1 Gene

Products for CAMTA1-AS1 Gene

Sources for CAMTA1-AS1 Gene