Aliases for CALM2P2 Gene

Aliases for CALM2P2 Gene

  • Calmodulin 2 Pseudogene 2 2 3 5
  • CALM2P2 5

External Ids for CALM2P2 Gene

Previous GeneCards Identifiers for CALM2P2 Gene

  • GC00U990034
  • GC10U900278
  • GC10P071268
  • GC10P071593
  • GC10P071924

Summaries for CALM2P2 Gene

GeneCards Summary for CALM2P2 Gene

CALM2P2 (Calmodulin 2 Pseudogene 2) is a Pseudogene.

Additional gene information for CALM2P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CALM2P2 Gene

Genomics for CALM2P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CALM2P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J070161 Enhancer 0.7 ENCODE 250.7 -0.5 -519 2.3 BCLAF1 IKZF1 TRIM22 IRF4 CBFB SMARCA5 SRF BATF SCRT1 MTA3 CALM2P2 HSALNG0078629 piR-54398-001 AIFM2 PPA1 lnc-TYSND1-2 SAR1A TYSND1 MK280269-008
GH10J070089 Promoter/Enhancer 1.2 Ensembl ENCODE 11.1 -71.5 -71538 4.3 CEBPA HOMEZ THAP11 KDM6A SMAD4 ZNF511 SAP130 MIER3 RARA GABPB1 NPFFR1 TYSND1 CALM2P2 SAR1A LRRC20 piR-51223 HSALNG0078620 MACROH2A2 HSALNG0078619 AIFM2
GH10J070331 Enhancer 1.1 ENCODE dbSUPER 10.2 +168.2 168194 1.4 MYC NCOR1 IKZF1 JUND ZNF592 CEBPA ZIC2 NFIC REST MBD2 TYSND1 NPFFR1 PPA1 CALM2P2 SAR1A HE856082 RF00017-615 LRRC20 MK280269-008
GH10J070190 Enhancer 0.9 Ensembl ENCODE 12.1 +28.3 28288 7.8 JUND NFIC CEBPB BHLHE40 MNT EP300 MAFF STAT3 ZNF316 MAFK HSALNG0078631 PPA1 AIFM2 SAR1A CALM2P2 TYSND1 lnc-PPA1-2 MK280269-008
GH10J070116 Enhancer 0.8 Ensembl ENCODE 11.7 -47.4 -47429 1.2 ZNF207 ZNF654 ZIC2 REST CTCF TRIM22 RAD21 RFX5 SMC3 ZNF143 RF00017-614 piR-56369 TYSND1 CALM2P2 SAR1A HSALNG0078621 AIFM2 MACROH2A2 MK280269-008
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CALM2P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CALM2P2 Gene

Latest Assembly
chr10:70,163,613-70,164,741
(GRCh38/hg38)
Size:
1,129 bases
Orientation:
Plus strand

Previous Assembly
chr10:71,923,369-71,924,497
(GRCh37/hg19 by Entrez Gene)
Size:
1,129 bases
Orientation:
Plus strand

chr10:71,923,441-71,923,880
(GRCh37/hg19 by Ensembl)
Size:
440 bases
Orientation:
Plus strand

Genomic View for CALM2P2 Gene

Genes around CALM2P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CALM2P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CALM2P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CALM2P2 Gene

Proteins for CALM2P2 Gene

Post-translational modifications for CALM2P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CALM2P2 Gene

Domains & Families for CALM2P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CALM2P2 Gene

Function for CALM2P2 Gene

Phenotypes From GWAS Catalog for CALM2P2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CALM2P2 Gene

Localization for CALM2P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CALM2P2 Gene

Pathways & Interactions for CALM2P2 Gene

PathCards logo

SuperPathways for CALM2P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CALM2P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CALM2P2 Gene

Drugs & Compounds for CALM2P2 Gene

No Compound Related Data Available

Transcripts for CALM2P2 Gene

mRNA/cDNA for CALM2P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CALM2P2 Gene

No ASD Table

Relevant External Links for CALM2P2 Gene

GeneLoc Exon Structure for
CALM2P2

Expression for CALM2P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CALM2P2 Gene

genes like me logo Genes that share expression patterns with CALM2P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CALM2P2 Gene

Orthologs for CALM2P2 Gene

Evolution for CALM2P2 Gene

ENSEMBL:
Gene Tree for CALM2P2 (if available)
TreeFam:
Gene Tree for CALM2P2 (if available)
Alliance of Genome Resources:
Additional Orthologs for CALM2P2

No data available for Orthologs for CALM2P2 Gene

Paralogs for CALM2P2 Gene

No data available for Paralogs for CALM2P2 Gene

Variants for CALM2P2 Gene

Additional Variant Information for CALM2P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CALM2P2
Leiden Open Variation Database (LOVD)
CALM2P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CALM2P2 Gene

Disorders for CALM2P2 Gene

No disorders were found for CALM2P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CALM2P2 Gene

Publications for CALM2P2 Gene

  1. Characterization of two novel human retropseudogenes related to the calmodulin-encoding gene, CaMII. (PMID: 1999288) Koller M … Strehler EE (Gene 1991) 2 3

Products for CALM2P2 Gene

Sources for CALM2P2 Gene