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Aliases for CACNA1C-AS3 Gene

Subcategory (RNA class) for CACNA1C-AS3 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for CACNA1C-AS3 Gene

  • CACNA1C Antisense RNA 3 2 3 5
  • CACNA1C Antisense RNA 3 (Non-Protein Coding) 2 3

External Ids for CACNA1C-AS3 Gene

Previous GeneCards Identifiers for CACNA1C-AS3 Gene

  • GC00U933206
  • GC12M002713

Summaries for CACNA1C-AS3 Gene

GeneCards Summary for CACNA1C-AS3 Gene

CACNA1C-AS3 (CACNA1C Antisense RNA 3) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for CACNA1C-AS3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CACNA1C-AS3 Gene

Genomics for CACNA1C-AS3 Gene

GeneHancer (GH) Regulatory Elements for CACNA1C-AS3 Gene

Promoters and enhancers for CACNA1C-AS3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J002609 Enhancer 0.4 Ensembl 600.7 -1.9 -1861 0.6 ZFHX2 EGR2 CACNA1C-AS3 RPS6P18 CACNA1C
GH12J002582 Promoter/Enhancer 1.2 Ensembl ENCODE 11.7 +24.2 24239 0.4 CTCF KLF14 RAD21 ZIC2 ZNF143 REST LARP7 ZNF692 ZNF561 TRIM22 CACNA1C-AS3 CACNA1C CACNA1C-AS4 PIR40542
GH12J002639 Enhancer 0.9 Ensembl ENCODE 11.5 -34.1 -34061 4.2 CTCF PRDM1 EGR1 FOSL2 POLR2A ZIC2 SMARCC1 SOX6 JUND PKNOX1 CACNA1C-AS3 CACNA1C RPS6P18
GH12J002645 Enhancer 0.4 Ensembl 11.5 -37.8 -37761 1.2 SCRT2 NR2F2 CACNA1C-AS3 CACNA1C RPS6P18
GH12J002644 Enhancer 0.2 Ensembl 11.5 -36.9 -36861 0.2 CACNA1C-AS3 CACNA1C RPS6P18
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CACNA1C-AS3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CACNA1C-AS3 Gene

Genomic Locations for CACNA1C-AS3 Gene
chr12:2,603,350-2,607,440
(GRCh38/hg38)
Size:
4,091 bases
Orientation:
Minus strand
chr12:2,712,516-2,716,606
(GRCh37/hg19)
Size:
4,091 bases
Orientation:
Minus strand

Genomic View for CACNA1C-AS3 Gene

Genes around CACNA1C-AS3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CACNA1C-AS3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CACNA1C-AS3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for CACNA1C-AS3 Gene

Proteins for CACNA1C-AS3 Gene

Post-translational modifications for CACNA1C-AS3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CACNA1C-AS3 Gene

Domains & Families for CACNA1C-AS3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CACNA1C-AS3 Gene

Function for CACNA1C-AS3 Gene

Phenotypes From GWAS Catalog for CACNA1C-AS3 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CACNA1C-AS3 Gene

Localization for CACNA1C-AS3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CACNA1C-AS3 Gene

Pathways & Interactions for CACNA1C-AS3 Gene

PathCards logo

SuperPathways for CACNA1C-AS3 Gene

No Data Available

Interacting Proteins for CACNA1C-AS3 Gene

Gene Ontology (GO) - Biological Process for CACNA1C-AS3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CACNA1C-AS3 Gene

Drugs & Compounds for CACNA1C-AS3 Gene

No Compound Related Data Available

Transcripts for CACNA1C-AS3 Gene

mRNA/cDNA for CACNA1C-AS3 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for CACNA1C-AS3 Gene

No ASD Table

Relevant External Links for CACNA1C-AS3 Gene

GeneLoc Exon Structure for
CACNA1C-AS3
ECgene alternative splicing isoforms for
CACNA1C-AS3

Expression for CACNA1C-AS3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CACNA1C-AS3 Gene

genes like me logo Genes that share expression patterns with CACNA1C-AS3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CACNA1C-AS3 Gene

Orthologs for CACNA1C-AS3 Gene

Evolution for CACNA1C-AS3 Gene

ENSEMBL:
Gene Tree for CACNA1C-AS3 (if available)
TreeFam:
Gene Tree for CACNA1C-AS3 (if available)

No data available for Orthologs for CACNA1C-AS3 Gene

Paralogs for CACNA1C-AS3 Gene

No data available for Paralogs for CACNA1C-AS3 Gene

Variants for CACNA1C-AS3 Gene

Additional Variant Information for CACNA1C-AS3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CACNA1C-AS3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CACNA1C-AS3 Gene

Disorders for CACNA1C-AS3 Gene

No disorders were found for CACNA1C-AS3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CACNA1C-AS3 Gene

Publications for CACNA1C-AS3 Gene

No publications were found for CACNA1C-AS3 Gene.

Products for CACNA1C-AS3 Gene

Sources for CACNA1C-AS3 Gene

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