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Aliases for CA5AP1 Gene

Aliases for CA5AP1 Gene

  • Carbonic Anhydrase 5A Pseudogene 1 2 3 5
  • Carbonic Anhydrase VA Pseudogene 1 2 3
  • Carbonic Anhydrase V Pseudogene 2 3
  • CA5P 3

External Ids for CA5AP1 Gene

Previous HGNC Symbols for CA5AP1 Gene

  • CA5P

Summaries for CA5AP1 Gene

GeneCards Summary for CA5AP1 Gene

CA5AP1 (Carbonic Anhydrase 5A Pseudogene 1) is a Pseudogene.

Additional gene information for CA5AP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CA5AP1 Gene

Genomics for CA5AP1 Gene

GeneHancer (GH) Regulatory Elements for CA5AP1 Gene

Promoters and enhancers for CA5AP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I029611 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 7.8 +22.3 22320 5.6 HDGF PKNOX1 ARID4B SIN3A DMAP1 ZNF207 FOS SP3 ZNF592 KAT8 PIR61517 SLC7A5P1 ATXN2L ENSG00000261766 NPIPB12 SH2B1 NPIPB13 INO80E SPNS1 ZNF764
GH16I029593 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 7.2 +41.4 41407 3 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 POLR2B ZNF213 ZNF207 ZNF143 SMG1P2 ENSG00000279583 NFATC2IP ATXN2L ENSG00000260853 ENSG00000260367 SPNS1 SMG1P5 INO80E ENSG00000198106
GH16I029598 Enhancer 1.4 Ensembl ENCODE dbSUPER 7.9 +32.9 32887 9.3 HDGF PKNOX1 ATF1 FOXA2 MLX ARID4B SIN3A DMAP1 ZNF48 TCF12 CA5AP1 GDPD3 SPNS1 SLX1B PIR60561 MIR3680-2 PIR61517 LOC105371168
GH16I029626 Enhancer 0.9 Ensembl ENCODE 5.4 +8.9 8871 1.9 HDGF PKNOX1 ZFHX2 FOXK2 SCRT2 ATF7 IKZF2 EGR2 SMARCA5 SCRT1 PIR32473 SPN QPRT CA5AP1
GH16I029644 Enhancer 1.2 Ensembl ENCODE 0.4 -8.9 -8913 2 HDGF ATF1 MLX ARNT ARID4B DMAP1 IRF4 ZNF48 ZNF207 ZNF143 SMG1P2 ENSG00000260853 SPNS1 SMG1P5 NPIPB12 INO80E NFATC2IP NPIPB13 ZNF747 ENSG00000260367
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CA5AP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CA5AP1 Gene

Genomic Locations for CA5AP1 Gene
chr16:29,618,675-29,636,331
(GRCh38/hg38)
Size:
17,657 bases
Orientation:
Minus strand
chr16:29,630,106-29,648,664
(GRCh37/hg19)

Genomic View for CA5AP1 Gene

Genes around CA5AP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CA5AP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CA5AP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CA5AP1 Gene

Proteins for CA5AP1 Gene

Post-translational modifications for CA5AP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CA5AP1 Gene

Domains & Families for CA5AP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CA5AP1 Gene

Function for CA5AP1 Gene

Phenotypes From GWAS Catalog for CA5AP1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CA5AP1 Gene

Localization for CA5AP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CA5AP1 Gene

Pathways & Interactions for CA5AP1 Gene

SuperPathways for CA5AP1 Gene

No Data Available

Interacting Proteins for CA5AP1 Gene

Gene Ontology (GO) - Biological Process for CA5AP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CA5AP1 Gene

Drugs & Compounds for CA5AP1 Gene

No Compound Related Data Available

Transcripts for CA5AP1 Gene

mRNA/cDNA for CA5AP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CA5AP1 Gene

No ASD Table

Relevant External Links for CA5AP1 Gene

GeneLoc Exon Structure for
CA5AP1
ECgene alternative splicing isoforms for
CA5AP1

Expression for CA5AP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CA5AP1 Gene

mRNA differential expression in normal tissues according to GTEx for CA5AP1 Gene

This gene is overexpressed in Testis (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of CA5AP1 Gene:

CA5AP1
genes like me logo Genes that share expression patterns with CA5AP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CA5AP1 Gene

Orthologs for CA5AP1 Gene

Evolution for CA5AP1 Gene

ENSEMBL:
Gene Tree for CA5AP1 (if available)
TreeFam:
Gene Tree for CA5AP1 (if available)

No data available for Orthologs for CA5AP1 Gene

Paralogs for CA5AP1 Gene

No data available for Paralogs for CA5AP1 Gene

Variants for CA5AP1 Gene

Additional Variant Information for CA5AP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CA5AP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CA5AP1 Gene

Disorders for CA5AP1 Gene

No disorders were found for CA5AP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CA5AP1 Gene

Publications for CA5AP1 Gene

  1. Genomic organization of the human gene (CA5) and pseudogene for mitochondrial carbonic anhydrase V and their localization to chromosomes 16q and 16p. (PMID: 7490083) Nagao Y … Sly WS (Genomics 1995) 2 3 58
  2. Carbonic anhydrase inhibitors. Zonisamide is an effective inhibitor of the cytosolic isozyme II and mitochondrial isozyme V: solution and X-ray crystallographic studies. (PMID: 15837316) De Simone G … Supuran CT (Bioorganic & medicinal chemistry letters 2005) 3 58

Products for CA5AP1 Gene

Sources for CA5AP1 Gene

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