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Aliases for C6orf47-AS1 Gene

Subcategory (RNA class) for C6orf47-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for C6orf47-AS1 Gene

  • C6orf47 Antisense RNA 1 2 3 5
  • C6orf47 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for C6orf47-AS1 Gene

Previous GeneCards Identifiers for C6orf47-AS1 Gene

  • GC00U933619
  • GC06P031627
  • GC06P031639
  • GC06P031723
  • GC06P031694
  • GC06P031755
  • GC06P031790
  • GC06P031818
  • GC06P031868
  • GC06P031909
  • GC06P031955

Summaries for C6orf47-AS1 Gene

GeneCards Summary for C6orf47-AS1 Gene

C6orf47-AS1 (C6orf47 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for C6orf47-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C6orf47-AS1 Gene

Genomics for C6orf47-AS1 Gene

GeneHancer (GH) Regulatory Elements for C6orf47-AS1 Gene

Promoters and enhancers for C6orf47-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I031658 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 550.8 +1.8 1809 3.9 HDGF PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 SLC30A9 POLR2B E2F8 BAG6 C6orf47 C6orf47-AS1 LY6G5C C4A LY6G5B MICB STK19B VWA7 CYP21A1P
GH06I031657 Enhancer 0.7 ENCODE 550.8 -0.7 -699 0.6 ZBTB10 KLF1 PKNOX1 ATF1 ZBTB21 NCOA1 REST ZNF398 ATF2 ZNF629 C6orf47-AS1 LY6G5B BAG6 APOM
GH06I031614 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE 11.4 -42.5 -42495 3.7 HDGF HDAC1 ELF3 FOXA2 IRF4 ZNF335 ZNF121 ATF7 ETV6 BCLAF1 AIF1 BAG6 LY6G5B HLA-DRB1 SKIV2L LY6G5C LST1 LTB C4A DDX39B
GH06I031650 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.4 -5.9 -5864 3.3 CLOCK MLX DMAP1 YY1 ZNF213 E2F8 ZNF143 SP3 MEF2D SSRP1 BAG6 APOM ATF6B DDX39B LY6G5B MDC1 LSM2 DHX16 PBX2 NRM
GH06I031654 Enhancer 0.9 ENCODE 0.8 -3.0 -2962 1.8 FOXA2 MLX ZFP64 ARID4B DMAP1 ZNF48 YY1 SLC30A9 ATF7 RXRA BAG6 MICB LY6G5B MICA-AS1 C6orf47-AS1 APOM
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around C6orf47-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for C6orf47-AS1 Gene

Genomic Locations for C6orf47-AS1 Gene
chr6:31,658,329-31,660,721
(GRCh38/hg38)
Size:
2,393 bases
Orientation:
Plus strand

Genomic View for C6orf47-AS1 Gene

Genes around C6orf47-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C6orf47-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C6orf47-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for C6orf47-AS1 Gene

Proteins for C6orf47-AS1 Gene

Post-translational modifications for C6orf47-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C6orf47-AS1 Gene

Domains & Families for C6orf47-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C6orf47-AS1 Gene

Function for C6orf47-AS1 Gene

Phenotypes From GWAS Catalog for C6orf47-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C6orf47-AS1 Gene

Localization for C6orf47-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for C6orf47-AS1 Gene

Pathways & Interactions for C6orf47-AS1 Gene

SuperPathways for C6orf47-AS1 Gene

No Data Available

Interacting Proteins for C6orf47-AS1 Gene

Gene Ontology (GO) - Biological Process for C6orf47-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C6orf47-AS1 Gene

Drugs & Compounds for C6orf47-AS1 Gene

No Compound Related Data Available

Transcripts for C6orf47-AS1 Gene

mRNA/cDNA for C6orf47-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for C6orf47-AS1 Gene

No ASD Table

Relevant External Links for C6orf47-AS1 Gene

GeneLoc Exon Structure for
C6orf47-AS1
ECgene alternative splicing isoforms for
C6orf47-AS1

Expression for C6orf47-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for C6orf47-AS1 Gene

genes like me logo Genes that share expression patterns with C6orf47-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C6orf47-AS1 Gene

Orthologs for C6orf47-AS1 Gene

Evolution for C6orf47-AS1 Gene

ENSEMBL:
Gene Tree for C6orf47-AS1 (if available)
TreeFam:
Gene Tree for C6orf47-AS1 (if available)

No data available for Orthologs for C6orf47-AS1 Gene

Paralogs for C6orf47-AS1 Gene

No data available for Paralogs for C6orf47-AS1 Gene

Variants for C6orf47-AS1 Gene

Additional Variant Information for C6orf47-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C6orf47-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for C6orf47-AS1 Gene

Disorders for C6orf47-AS1 Gene

No disorders were found for C6orf47-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for C6orf47-AS1 Gene

Publications for C6orf47-AS1 Gene

No publications were found for C6orf47-AS1 Gene.

Products for C6orf47-AS1 Gene

Sources for C6orf47-AS1 Gene

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