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Aliases for C5orf64-AS1 Gene

Subcategory (RNA class) for C5orf64-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for C5orf64-AS1 Gene

  • C5orf64 Antisense RNA 1 2 3 5
  • CTD-2170G1.2 3

External Ids for C5orf64-AS1 Gene

Summaries for C5orf64-AS1 Gene

GeneCards Summary for C5orf64-AS1 Gene

C5orf64-AS1 (C5orf64 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for C5orf64-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C5orf64-AS1 Gene

Genomics for C5orf64-AS1 Gene

GeneHancer (GH) Regulatory Elements for C5orf64-AS1 Gene

Promoters and enhancers for C5orf64-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J061736 Enhancer 0.7 FANTOM5 ENCODE 650.7 -1.4 -1421 1.1 MXI1 RFX1 POLR2A FOXP2 C5orf64-AS1 GC05P061738 ENSG00000248529 C5orf64
GH05J061686 Enhancer 0.4 dbSUPER 5.9 +48.7 48710 1 PRDM10 FEZF1 RNU6-913P C5orf64-AS1 ENSG00000248529 LOC101928651 GC05M061665 C5orf64
GH05J061731 Enhancer 0.5 ENCODE 0.7 +3.8 3803 1.3 SP1 RXRA GATAD2B RAD21 PRDM1 NR2F2 ENSG00000248529 C5orf64-AS1 LOC101928651 C5orf64
GH05J061738 Enhancer 0.4 UCNEbase 0.7 -2.5 -2507 0.3 GC05P061738 C5orf64-AS1 C5orf64
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around C5orf64-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for C5orf64-AS1 Gene

Genomic Locations for C5orf64-AS1 Gene
chr5:61,732,774-61,735,698
(GRCh38/hg38)
Size:
2,925 bases
Orientation:
Minus strand
chr5:61,028,601-61,031,496
(GRCh37/hg19)

Genomic View for C5orf64-AS1 Gene

Genes around C5orf64-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C5orf64-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C5orf64-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C5orf64-AS1 Gene

Proteins for C5orf64-AS1 Gene

Post-translational modifications for C5orf64-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C5orf64-AS1 Gene

Domains & Families for C5orf64-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C5orf64-AS1 Gene

Function for C5orf64-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C5orf64-AS1 Gene

Localization for C5orf64-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for C5orf64-AS1 Gene

Pathways & Interactions for C5orf64-AS1 Gene

SuperPathways for C5orf64-AS1 Gene

No Data Available

Interacting Proteins for C5orf64-AS1 Gene

Gene Ontology (GO) - Biological Process for C5orf64-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C5orf64-AS1 Gene

Drugs & Compounds for C5orf64-AS1 Gene

No Compound Related Data Available

Transcripts for C5orf64-AS1 Gene

mRNA/cDNA for C5orf64-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(3) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for C5orf64-AS1 Gene

No ASD Table

Relevant External Links for C5orf64-AS1 Gene

GeneLoc Exon Structure for
C5orf64-AS1
ECgene alternative splicing isoforms for
C5orf64-AS1

Expression for C5orf64-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C5orf64-AS1 Gene

Orthologs for C5orf64-AS1 Gene

Evolution for C5orf64-AS1 Gene

ENSEMBL:
Gene Tree for C5orf64-AS1 (if available)
TreeFam:
Gene Tree for C5orf64-AS1 (if available)

No data available for Orthologs for C5orf64-AS1 Gene

Paralogs for C5orf64-AS1 Gene

No data available for Paralogs for C5orf64-AS1 Gene

Variants for C5orf64-AS1 Gene

Sequence variations from dbSNP and Humsavar for C5orf64-AS1 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000813965 -- 61,734,615(-) C/T intron_variant
rs1000928155 -- 61,734,836(-) G/C intron_variant
rs1001498391 -- 61,732,963(-) C/T non_coding_transcript_variant
rs1002184234 -- 61,734,769(-) A/G intron_variant
rs1002259606 -- 61,734,388(-) A/G intron_variant

Additional Variant Information for C5orf64-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C5orf64-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for C5orf64-AS1 Gene

Disorders for C5orf64-AS1 Gene

Additional Disease Information for C5orf64-AS1

No disorders were found for C5orf64-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C5orf64-AS1 Gene

Publications for C5orf64-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for C5orf64-AS1 Gene

Sources for C5orf64-AS1 Gene

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