Aliases for C5orf34-AS1 Gene

Data sources for C5orf34-AS1 Gene:

RNA type for C5orf34-AS1 Gene

lncRNA

Aliases for C5orf34-AS1 Gene

External Ids for C5orf34-AS1 Gene

Previous GeneCards Identifiers for C5orf34-AS1 Gene

  • GC05P043513
  • GC05P043535

Summaries for C5orf34-AS1 Gene

GeneCards Summary for C5orf34-AS1 Gene

C5orf34-AS1 (C5orf34 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Rfam classification for C5orf34-AS1 Gene

Additional gene information for C5orf34-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for C5orf34-AS1 Gene

Genomics for C5orf34-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for C5orf34-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around C5orf34-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for C5orf34-AS1 Gene

Latest Assembly
chr5:43,483,913-43,521,811
(GRCh38/hg38)
Size:
37,899 bases
Orientation:
Plus strand

Previous Assembly
chr5:43,511,160-43,521,913
(GRCh37/hg19 by Ensembl)
Size:
10,754 bases
Orientation:
Plus strand

Genomic View for C5orf34-AS1 Gene

Genes around C5orf34-AS1 on UCSC Golden Path with GeneCards custom track
C5orf34-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
C5orf34-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C5orf34-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C5orf34-AS1 Gene

Proteins for C5orf34-AS1 Gene

Post-translational modifications for C5orf34-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C5orf34-AS1 Gene

Domains & Families for C5orf34-AS1 Gene

Gene Families for C5orf34-AS1 Gene

genes like me logo Genes that share domains with C5orf34-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for C5orf34-AS1 Gene

Function for C5orf34-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C5orf34-AS1 Gene

Localization for C5orf34-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for C5orf34-AS1 Gene

Pathways & Interactions for C5orf34-AS1 Gene

PathCards logo

SuperPathways for C5orf34-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for C5orf34-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for C5orf34-AS1 Gene

Drugs & Compounds for C5orf34-AS1 Gene

No Compound Related Data Available

Transcripts for C5orf34-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for C5orf34-AS1 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00000E186E_9606 lncRNA 575 3

Ensembl: ENST00000512498 (view in UCSC) ,

LNCipedia: lnc-NNT-2:1,

NONCODE: NONHSAT101317.2,

URS00008C352D_9606 lncRNA 8268 2

LNCipedia: lnc-NNT-2:2,

NONCODE: NONHSAT101318.2,

URS0000D59D2D_9606 lncRNA 6880 2

LncBook: HSALNT0087275,

LNCipedia: lnc-NNT-2:5,

URS00009B5B00_9606 lncRNA 1633 2

LncBook: HSALNT0087278,

NONCODE: NONHSAT202559.1,

URS00009C4756_9606 lncRNA 512 2

LncBook: HSALNT0087277,

NONCODE: NONHSAT202558.1,

C5orf34-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for C5orf34-AS1 Gene

No ASD Table

Relevant External Links for C5orf34-AS1 Gene

GeneLoc Exon Structure for
C5orf34-AS1

No data available for mRNA/cDNA for C5orf34-AS1 Gene

Expression for C5orf34-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C5orf34-AS1 Gene

Orthologs for C5orf34-AS1 Gene

Evolution for C5orf34-AS1 Gene

ENSEMBL:
Gene Tree for C5orf34-AS1 (if available)
TreeFam:
Gene Tree for C5orf34-AS1 (if available)
Alliance of Genome Resources:
Additional Orthologs for C5orf34-AS1

No data available for Orthologs for C5orf34-AS1 Gene

Paralogs for C5orf34-AS1 Gene

No data available for Paralogs for C5orf34-AS1 Gene

Variants for C5orf34-AS1 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for C5orf34-AS1 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for C5orf34-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C5orf34-AS1
Leiden Open Variation Database (LOVD)
C5orf34-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for C5orf34-AS1 Gene

Disorders for C5orf34-AS1 Gene

No disorders were found for C5orf34-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for C5orf34-AS1 Gene

Publications for C5orf34-AS1 Gene

No publications were found for C5orf34-AS1 Gene.

No data available for Mastermind for C5orf34-AS1 Gene

Products for C5orf34-AS1 Gene

Sources for C5orf34-AS1 Gene