Aliases for C5orf34-AS1 Gene

Subcategory (RNA class) for C5orf34-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for C5orf34-AS1 Gene

  • C5orf34 Antisense RNA 1 2 3
  • HSALNG0041516 167
  • NONHSAG040318 92
  • C5orf34-AS1 2
  • Lnc-NNT-2 168

External Ids for C5orf34-AS1 Gene

Previous GeneCards Identifiers for C5orf34-AS1 Gene

  • GC05P043513

Summaries for C5orf34-AS1 Gene

GeneCards Summary for C5orf34-AS1 Gene

C5orf34-AS1 (C5orf34 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Rfam classification for C5orf34-AS1 Gene

Additional gene information for C5orf34-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for C5orf34-AS1 Gene

Genomics for C5orf34-AS1 Gene

GeneHancer (GH) Regulatory Elements for C5orf34-AS1 Gene

Promoters and enhancers for C5orf34-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J043513 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.7 +3.5 3536 3.2 FOXK2 ZBTB40 ZNF217 SIN3A NRF1 POLR2G GTF2E2 PHF8 ZNF639 ZNF10 ENSG00000248240 C5orf34 lnc-PAIP1-2 NNT ENSG00000249492 ZNF131 C5orf34-AS1 ENSG00000248554 piR-54764-507
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around C5orf34-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for C5orf34-AS1 Gene

Genomic Locations for C5orf34-AS1 Gene
chr5:43,511,264-43,529,468
(GRCh38/hg38)
Size:
18,205 bases
Orientation:
Plus strand

Genomic View for C5orf34-AS1 Gene

Genes around C5orf34-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C5orf34-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C5orf34-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C5orf34-AS1 Gene

Proteins for C5orf34-AS1 Gene

Post-translational modifications for C5orf34-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C5orf34-AS1 Gene

Domains & Families for C5orf34-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for C5orf34-AS1 Gene

Function for C5orf34-AS1 Gene

Phenotypes From GWAS Catalog for C5orf34-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C5orf34-AS1 Gene

Localization for C5orf34-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for C5orf34-AS1 Gene

Pathways & Interactions for C5orf34-AS1 Gene

PathCards logo

SuperPathways for C5orf34-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for C5orf34-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for C5orf34-AS1 Gene

Drugs & Compounds for C5orf34-AS1 Gene

No Compound Related Data Available

Transcripts for C5orf34-AS1 Gene

mRNA/cDNA for C5orf34-AS1 Gene

10 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
5 NONCODE transcripts :
4 LncBook transcripts :
7 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for C5orf34-AS1 Gene

No ASD Table

Relevant External Links for C5orf34-AS1 Gene

GeneLoc Exon Structure for
C5orf34-AS1

Expression for C5orf34-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C5orf34-AS1 Gene

Orthologs for C5orf34-AS1 Gene

No data available for Orthologs and Evolution for C5orf34-AS1 Gene

Paralogs for C5orf34-AS1 Gene

No data available for Paralogs for C5orf34-AS1 Gene

Variants for C5orf34-AS1 Gene

Additional dbSNP identifiers (rs#s) for C5orf34-AS1 Gene

Additional Variant Information for C5orf34-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C5orf34-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for C5orf34-AS1 Gene

Disorders for C5orf34-AS1 Gene

No disorders were found for C5orf34-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for C5orf34-AS1 Gene

Publications for C5orf34-AS1 Gene

No publications were found for C5orf34-AS1 Gene.

No data available for Mastermind for C5orf34-AS1 Gene

Products for C5orf34-AS1 Gene

Sources for C5orf34-AS1 Gene