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Aliases for C5-OT1 Gene

Subcategory (RNA class) for C5-OT1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for C5-OT1 Gene

  • C5 3'UTR Overlapping Transcript 1 2 3
  • C5-TRAF1-Long Non-Coding RNA 3
  • C5T1LNCRNA 3

External Ids for C5-OT1 Gene

Summaries for C5-OT1 Gene

GeneCards Summary for C5-OT1 Gene

C5-OT1 (C5 3'UTR Overlapping Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for C5-OT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C5-OT1 Gene

Genomics for C5-OT1 Gene

Genomic Locations for C5-OT1 Gene

Genomic Locations for C5-OT1 Gene
chr9:-
(GRCh38/hg38)
Orientation:
Unknown strand

Genomic View for C5-OT1 Gene


Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for C5-OT1 Gene

No data available for GeneHancer (GH) Regulatory Elements for C5-OT1 Gene

Function for C5-OT1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C5-OT1 Gene

Localization for C5-OT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for C5-OT1 Gene

Pathways & Interactions for C5-OT1 Gene

SuperPathways for C5-OT1 Gene

No Data Available

Interacting Proteins for C5-OT1 Gene

Gene Ontology (GO) - Biological Process for C5-OT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C5-OT1 Gene

Drugs & Compounds for C5-OT1 Gene

No Compound Related Data Available

Transcripts for C5-OT1 Gene

mRNA/cDNA for C5-OT1 Gene

(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for C5-OT1 Gene

No ASD Table

Relevant External Links for C5-OT1 Gene

ECgene alternative splicing isoforms for
C5-OT1

Expression for C5-OT1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C5-OT1 Gene

Orthologs for C5-OT1 Gene

No data available for Orthologs and Evolution for C5-OT1 Gene

Paralogs for C5-OT1 Gene

No data available for Paralogs for C5-OT1 Gene

Variants for C5-OT1 Gene

Additional Variant Information for C5-OT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C5-OT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for C5-OT1 Gene

Disorders for C5-OT1 Gene

Additional Disease Information for C5-OT1

No disorders were found for C5-OT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C5-OT1 Gene

Publications for C5-OT1 Gene

  1. A novel long non-coding RNA in the rheumatoid arthritis risk locus TRAF1-C5 influences C5 mRNA levels. (PMID: 26673966) Messemaker TC … Kurreeman F (Genes and immunity 2016) 2 3 58

Products for C5-OT1 Gene

Sources for C5-OT1 Gene

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