Aliases for C4BPAP1 Gene

Aliases for C4BPAP1 Gene

  • C4BPA Pseudogene 1 2 3 5
  • Complement Component 4 Binding Protein, Alpha Pseudogene 1 2 3
  • Complement Component 4-Binding Protein, Alpha-Like 1 2 3
  • C4BPAL1 3

External Ids for C4BPAP1 Gene

Previous HGNC Symbols for C4BPAP1 Gene

  • C4BPAL1

Previous GeneCards Identifiers for C4BPAP1 Gene

  • GC01P207340

Summaries for C4BPAP1 Gene

GeneCards Summary for C4BPAP1 Gene

C4BPAP1 (C4BPA Pseudogene 1) is a Pseudogene.

Additional gene information for C4BPAP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for C4BPAP1 Gene

Genomics for C4BPAP1 Gene

GeneHancer (GH) Regulatory Elements for C4BPAP1 Gene

Promoters and enhancers for C4BPAP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J207152 Enhancer 0.9 ENCODE 0.4 -12.3 -12332 1.4 FOXK2 POLR2G ZBTB11 ZBTB25 EP300 TEAD1 ZBTB26 ZKSCAN8 ZSCAN9 CREB1 ENSG00000226565 C4BPAP1
GH01J207171 Enhancer 0.5 Ensembl 0.4 +7.6 7606 2.6 SCRT1 SPI1 ZNF133 PKNOX1 ZNF24 HMBOX1 FOXA1 SCRT2 C4BPA CD55 C4BPAP1 ENSG00000243636
GH01J207154 Enhancer 0.4 Ensembl 0.4 -9.6 -9594 2.6 CEBPG SPI1 FOS MAX C4BPA ENSG00000226565 C4BPAP1
GH01J207160 Enhancer 0.2 Ensembl 0.7 -4.9 -4894 0.8 C4BPA C4BPAP1 ENSG00000226565
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around C4BPAP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for C4BPAP1 Gene

Genomic Locations for C4BPAP1 Gene
chr1:207,165,495-207,184,061
(GRCh38/hg38)
Size:
18,567 bases
Orientation:
Plus strand
chr1:207,338,840-207,357,406
(GRCh37/hg19)
Size:
18,567 bases
Orientation:
Plus strand

Genomic View for C4BPAP1 Gene

Genes around C4BPAP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C4BPAP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C4BPAP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C4BPAP1 Gene

Proteins for C4BPAP1 Gene

Post-translational modifications for C4BPAP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C4BPAP1 Gene

Domains & Families for C4BPAP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for C4BPAP1 Gene

Function for C4BPAP1 Gene

Phenotypes for C4BPAP1 Gene

genes like me logo Genes that share phenotypes with C4BPAP1: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C4BPAP1 Gene

Localization for C4BPAP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for C4BPAP1 Gene

Pathways & Interactions for C4BPAP1 Gene

PathCards logo

SuperPathways for C4BPAP1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for C4BPAP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for C4BPAP1 Gene

Drugs & Compounds for C4BPAP1 Gene

No Compound Related Data Available

Transcripts for C4BPAP1 Gene

mRNA/cDNA for C4BPAP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for C4BPAP1 Gene

No ASD Table

Relevant External Links for C4BPAP1 Gene

GeneLoc Exon Structure for
C4BPAP1

Expression for C4BPAP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for C4BPAP1 Gene

mRNA differential expression in normal tissues according to GTEx for C4BPAP1 Gene

This gene is overexpressed in Testis (x39.0) and Liver (x8.8).
genes like me logo Genes that share expression patterns with C4BPAP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C4BPAP1 Gene

Orthologs for C4BPAP1 Gene

Evolution for C4BPAP1 Gene

ENSEMBL:
Gene Tree for C4BPAP1 (if available)
TreeFam:
Gene Tree for C4BPAP1 (if available)

No data available for Orthologs for C4BPAP1 Gene

Paralogs for C4BPAP1 Gene

No data available for Paralogs for C4BPAP1 Gene

Variants for C4BPAP1 Gene

Additional Variant Information for C4BPAP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C4BPAP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for C4BPAP1 Gene

Disorders for C4BPAP1 Gene

No disorders were found for C4BPAP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for C4BPAP1 Gene

Publications for C4BPAP1 Gene

  1. Human genes for the alpha and beta chains of complement C4b-binding protein are closely linked in a head-to-tail arrangement. (PMID: 2352933) Pardo-Manuel F … Rodriguez de Cordoba S (Proceedings of the National Academy of Sciences of the United States of America 1990) 2 3 54
  2. C4BPAL1, a member of the human regulator of complement activation (RCA) gene cluster that resulted from the duplication of the gene coding for the alpha-chain of C4b-binding protein. (PMID: 8406448) Sánchez-Corral P … Rodríguez de Córdoba S (Genomics 1993) 3 54

Products for C4BPAP1 Gene

Sources for C4BPAP1 Gene