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Aliases for C3orf86 Gene

Aliases for C3orf86 Gene

  • Chromosome 3 Open Reading Frame 86 2 3
  • Long Intergenic Non-Protein Coding RNA 694 2 3
  • Putative Uncharacterized Protein LINC00694 3
  • LINC00694 3

External Ids for C3orf86 Gene

Previous HGNC Symbols for C3orf86 Gene

  • LINC00694

Summaries for C3orf86 Gene

GeneCards Summary for C3orf86 Gene

C3orf86 (Chromosome 3 Open Reading Frame 86) is a Protein Coding gene.

Additional gene information for C3orf86 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C3orf86 Gene

Genomics for C3orf86 Gene

GeneHancer (GH) Regulatory Elements for C3orf86 Gene

Promoters and enhancers for C3orf86 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J045223 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 4.9 -801.1 -801117 3.3 ATF1 RB1 SREBF2 ARID4B SIN3A RAD21 ZNF335 EGR1 ZNF143 ATF7 TMEM158 C3orf86 CXCR6 LOC101928636
GH03J045218 Enhancer 1.1 Ensembl ENCODE dbSUPER 4.9 -795.0 -794968 1.6 JUN MAX FOSL1 GATA3 POLR2A EGR1 RCOR1 FOS SMARCE1 DPF2 CDCP1 ENSG00000202268 CLEC3B RNU5B-3P C3orf86 CXCR6 TMEM158 LOC101928636
GH03J044337 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.2 +85.0 84989 3.6 HDGF PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 SLC30A9 LOC105377055 TCAIM ZNF660 ZNF445 ZNF852 ZNF502 SNRK-AS1 ZNF197 ZNF35 ENSG00000271941
GH03J044414 Enhancer 0.5 ENCODE 0.4 +9.3 9293 1.2 HLF CEBPA CEBPB CBFA2T3 CEBPG ZIC2 ZNF502 C3orf86 LOC105377055
GH03J044355 Enhancer 1 Ensembl ENCODE 0.2 +68.3 68330 1.3 HDAC1 ATF1 FOXA2 PKNOX1 RFX5 YY1 TCF12 FOS ATF7 RXRA ZNF660 ZNF445 ZNF197 TCAIM LOC105377055 C3orf86
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around C3orf86 on UCSC Golden Path with GeneCards custom track

Genomic Locations for C3orf86 Gene

Genomic Locations for C3orf86 Gene
chr3:44,421,132-44,424,058
(GRCh38/hg38)
Size:
2,927 bases
Orientation:
Minus strand
chr3:44,462,619-44,465,499
(GRCh37/hg19)

Genomic View for C3orf86 Gene

Genes around C3orf86 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C3orf86 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C3orf86 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C3orf86 Gene

Proteins for C3orf86 Gene

Post-translational modifications for C3orf86 Gene

No Post-translational modifications

Other Protein References for C3orf86 Gene

No data available for DME Specific Peptides for C3orf86 Gene

Domains & Families for C3orf86 Gene

Gene Families for C3orf86 Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C3orf86: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C3orf86 Gene

Function for C3orf86 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C3orf86 Gene

Localization for C3orf86 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for C3orf86 Gene

Pathways & Interactions for C3orf86 Gene

SuperPathways for C3orf86 Gene

No Data Available

Interacting Proteins for C3orf86 Gene

Gene Ontology (GO) - Biological Process for C3orf86 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C3orf86 Gene

Drugs & Compounds for C3orf86 Gene

No Compound Related Data Available

Transcripts for C3orf86 Gene

mRNA/cDNA for C3orf86 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for C3orf86 Gene

No ASD Table

Relevant External Links for C3orf86 Gene

GeneLoc Exon Structure for
C3orf86
ECgene alternative splicing isoforms for
C3orf86

Expression for C3orf86 Gene

NURSA nuclear receptor signaling pathways regulating expression of C3orf86 Gene:

C3orf86
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C3orf86 Gene

Orthologs for C3orf86 Gene

No data available for Orthologs and Evolution for C3orf86 Gene

Paralogs for C3orf86 Gene

No data available for Paralogs for C3orf86 Gene

Variants for C3orf86 Gene

Sequence variations from dbSNP and Humsavar for C3orf86 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000311388 -- 44,423,818(-) T/A genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000322384 -- 44,423,374(-) G/A genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1001004083 -- 44,425,608(-) T/C upstream_transcript_variant
rs1001454923 -- 44,425,853(-) A/G upstream_transcript_variant
rs1001761192 -- 44,422,812(-) A/G intron_variant

Additional Variant Information for C3orf86 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C3orf86

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for C3orf86 Gene

Disorders for C3orf86 Gene

Additional Disease Information for C3orf86

No disorders were found for C3orf86 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C3orf86 Gene

Publications for C3orf86 Gene

No publications were found for C3orf86 Gene.

Products for C3orf86 Gene

Sources for C3orf86 Gene

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