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Aliases for C20orf204 Gene

Aliases for C20orf204 Gene

  • Chromosome 20 Open Reading Frame 204 2 3 5
  • Long Intergenic Non-Protein Coding RNA 176 2 3
  • Putative Proline-Rich Protein 17 3 4
  • Proline Rich 17 2 3
  • NCRNA00176 3 4
  • LINC00176 3 4
  • PRR17 3 4
  • Putative Uncharacterized Protein C20orf204 3
  • Non-Protein Coding RNA 176 2

External Ids for C20orf204 Gene

Previous HGNC Symbols for C20orf204 Gene

  • PRR17
  • NCRNA00176
  • LINC00176

Previous GeneCards Identifiers for C20orf204 Gene

  • GC20P064066
  • GC20P064091

Summaries for C20orf204 Gene

GeneCards Summary for C20orf204 Gene

C20orf204 (Chromosome 20 Open Reading Frame 204) is a Protein Coding gene.

Additional gene information for C20orf204 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C20orf204 Gene

Genomics for C20orf204 Gene

GeneHancer (GH) Regulatory Elements for C20orf204 Gene

Promoters and enhancers for C20orf204 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20I064034 Enhancer 1 ENCODE 564.4 +1.7 1683 3.7 PKNOX1 SMAD1 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF48 SLC30A9 GLIS2 C20orf204 PRPF6 RGS19 TCEA2
GH20I063977 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 23.3 -54.5 -54540 4.8 MLX ZFP64 YBX1 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 PRPF6 SAMD10 C20orf204 GMEB2 CICP4 RTEL1 ZNF512B
GH20I064038 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 18.1 +6.1 6121 4.7 ZFP64 ARID4B SIN3A DMAP1 ZNF2 SLC30A9 ZNF207 ZNF143 DEK PAF1 TCEA2 C20orf204 PRPF6
GH20I063971 Enhancer 1.5 Ensembl ENCODE dbSUPER 20.3 -60.7 -60741 3.8 HDGF PKNOX1 FOXA2 ARNT ZFP64 ARID4B SIN3A YBX1 DMAP1 ZNF2 MIR647 UCKL1 PRPF6 C20orf204 RTEL1 TNFRSF6B ARFRP1 YTHDF1 ENSG00000237371 PCMTD2
GH20I064048 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 8.7 +15.7 15745 2.6 HDGF ARID4B FEZF1 DMAP1 ZNF48 SLC30A9 ZNF121 GLIS2 KLF7 SP3 GC20M064049 PIR32513 SOX18 PRPF6 C20orf204 TCEA2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around C20orf204 on UCSC Golden Path with GeneCards custom track

Genomic Locations for C20orf204 Gene

Genomic Locations for C20orf204 Gene
5,619 bases
Plus strand

Genomic View for C20orf204 Gene

Genes around C20orf204 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C20orf204 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C20orf204 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C20orf204 Gene

Proteins for C20orf204 Gene

  • Protein details for C20orf204 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein C20orf204
    Protein Accession:

    Protein attributes for C20orf204 Gene

    217 amino acids
    Molecular mass:
    22251 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C20orf204 Gene

Post-translational modifications for C20orf204 Gene

No Post-translational modifications

Other Protein References for C20orf204 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C20orf204 Gene

Domains & Families for C20orf204 Gene

Gene Families for C20orf204 Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins
  • Predicted secreted proteins

Protein Domains for C20orf204 Gene


Suggested Antigen Peptide Sequences for C20orf204 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C20orf204: view

No data available for UniProtKB/Swiss-Prot for C20orf204 Gene

Function for C20orf204 Gene

Phenotypes From GWAS Catalog for C20orf204 Gene

Phenotypes for C20orf204 Gene

genes like me logo Genes that share phenotypes with C20orf204: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C20orf204 Gene

Localization for C20orf204 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for C20orf204 Gene

Pathways & Interactions for C20orf204 Gene

SuperPathways for C20orf204 Gene

No Data Available

Interacting Proteins for C20orf204 Gene

Gene Ontology (GO) - Biological Process for C20orf204 Gene


No data available for Pathways by source and SIGNOR curated interactions for C20orf204 Gene

Drugs & Compounds for C20orf204 Gene

No Compound Related Data Available

Transcripts for C20orf204 Gene

mRNA/cDNA for C20orf204 Gene

(2) REFSEQ mRNAs :
(12) Selected AceView cDNA sequences:
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for C20orf204 Gene

No ASD Table

Relevant External Links for C20orf204 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for C20orf204 Gene

NURSA nuclear receptor signaling pathways regulating expression of C20orf204 Gene:

No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C20orf204 Gene

Orthologs for C20orf204 Gene

Evolution for C20orf204 Gene

Gene Tree for C20orf204 (if available)
Gene Tree for C20orf204 (if available)

No data available for Orthologs for C20orf204 Gene

Paralogs for C20orf204 Gene

No data available for Paralogs for C20orf204 Gene

Variants for C20orf204 Gene

Sequence variations from dbSNP and Humsavar for C20orf204 Gene

SNP ID Clin Chr 20 pos Variation AA Info Type
rs114637353 likely-benign, Retinitis Pigmentosa, Dominant 64,033,000(+) G/A/T upstream_transcript_variant
rs139778757 uncertain-significance, Retinitis Pigmentosa, Dominant 64,032,910(+) G/A upstream_transcript_variant
rs140112205 uncertain-significance, Retinitis Pigmentosa, Dominant 64,032,855(+) G/T upstream_transcript_variant
rs145731410 uncertain-significance, Retinitis Pigmentosa, Dominant 64,032,946(+) G/A upstream_transcript_variant
rs7550 likely-benign, Retinitis Pigmentosa, Dominant 64,033,012(+) C/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for C20orf204 Gene

Variant ID Type Subtype PubMed ID
dgv7699n54 CNV loss 21841781
esv2758807 CNV gain+loss 17122850
nsv1160691 CNV deletion 26073780
nsv428381 CNV gain+loss 18775914
nsv469773 CNV gain 16826518
nsv470564 CNV gain 18288195
nsv509785 CNV insertion 20534489
nsv586703 CNV loss 21841781
nsv953310 CNV deletion 24416366

Additional Variant Information for C20orf204 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for C20orf204 Gene

Disorders for C20orf204 Gene

No disorders were found for C20orf204 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C20orf204 Gene

Publications for C20orf204 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 58
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

Products for C20orf204 Gene

Sources for C20orf204 Gene

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