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Aliases for C20orf187 Gene

Subcategory (RNA class) for C20orf187 Gene


Quality Score for this RNA gene is


Aliases for C20orf187 Gene

  • Chromosome 20 Open Reading Frame 187 (Putative) 2 3 5
  • Chromosome 20 Open Reading Frame 187 2

External Ids for C20orf187 Gene

Previous GeneCards Identifiers for C20orf187 Gene

  • GC20P010996
  • GC20M010956
  • GC20P011003
  • GC20P010956
  • GC20U900199
  • GC20P011008

Summaries for C20orf187 Gene

GeneCards Summary for C20orf187 Gene

C20orf187 (Chromosome 20 Open Reading Frame 187 (Putative)) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for C20orf187 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C20orf187 Gene

Genomics for C20orf187 Gene

GeneHancer (GH) Regulatory Elements for C20orf187 Gene

Promoters and enhancers for C20orf187 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J010862 Enhancer 0.9 Ensembl ENCODE 650.7 -0.5 -484 0.4 SOX13 PKNOX1 FOXA2 NFIB CEBPG FEZF1 RAD21 GATA3 ATF7 FOSL2 C20orf187 GC20M010834 LOC105372525 ENSG00000270792
GH20J010861 Enhancer 0.8 Ensembl ENCODE 650.7 -0.9 -923 0.3 CEBPB CEBPG EP300 RAD21 ATF2 PRDM6 JUND ATF7 RUNX3 PRDM1 C20orf187 GC20M010834 LOC105372525 ENSG00000270792
GH20J010663 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 4.4 -192.5 -192467 12.6 HDGF PKNOX1 FOXA2 MLX ZFP64 ARID4B SIN3A DMAP1 IRF4 YY1 JAG1 LOC100421490 C20orf187 ENSG00000270792 GC20M010673 GC20P010675 MIR6870
GH20J010855 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.7 -5.0 -4995 2.4 FOXA2 SIN3A YBX1 RAD21 ETS1 EGR1 CREM HMG20B ZNF680 RXRA C20orf187 LOC105372525 GC20M010834 ENSG00000270792
GH20J010863 Enhancer 0.8 Ensembl ENCODE 0.7 +2.0 2028 2.1 KLF1 NFIB JUN FEZF1 ZBTB8A KLF4 ZNF843 JUND ZNF544 POLR2A LOC100421490 C20orf187 GC20M010834 ENSG00000270792
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around C20orf187 on UCSC Golden Path with GeneCards custom track

Genomic Locations for C20orf187 Gene

Genomic Locations for C20orf187 Gene
167,445 bases
Plus strand
1,607 bases
Plus strand

Genomic View for C20orf187 Gene

Genes around C20orf187 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C20orf187 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C20orf187 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C20orf187 Gene

Proteins for C20orf187 Gene

  • Protein details for C20orf187 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein C20orf187
    Protein Accession:

    Protein attributes for C20orf187 Gene

    50 amino acids
    Molecular mass:
    5874 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C20orf187 Gene

Post-translational modifications for C20orf187 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C20orf187 Gene

Domains & Families for C20orf187 Gene

Protein Domains for C20orf187 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C20orf187: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C20orf187 Gene

Function for C20orf187 Gene

Phenotypes From GWAS Catalog for C20orf187 Gene

Phenotypes for C20orf187 Gene

genes like me logo Genes that share phenotypes with C20orf187: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C20orf187 Gene

Localization for C20orf187 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for C20orf187 gene
Compartment Confidence
extracellular 3
cytosol 2
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for C20orf187 Gene

Pathways & Interactions for C20orf187 Gene

SuperPathways for C20orf187 Gene

No Data Available

Interacting Proteins for C20orf187 Gene

Gene Ontology (GO) - Biological Process for C20orf187 Gene


No data available for Pathways by source and SIGNOR curated interactions for C20orf187 Gene

Drugs & Compounds for C20orf187 Gene

No Compound Related Data Available

Transcripts for C20orf187 Gene

mRNA/cDNA for C20orf187 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for C20orf187 Gene

No ASD Table

Relevant External Links for C20orf187 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for C20orf187 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for C20orf187 Gene

mRNA differential expression in normal tissues according to GTEx for C20orf187 Gene

This gene is overexpressed in Testis (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of C20orf187 Gene:

genes like me logo Genes that share expression patterns with C20orf187: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C20orf187 Gene

Orthologs for C20orf187 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for C20orf187 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia C20orf187 34
  • 92 (a)
Species where no ortholog for C20orf187 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C20orf187 Gene

Gene Tree for C20orf187 (if available)
Gene Tree for C20orf187 (if available)

Paralogs for C20orf187 Gene

No data available for Paralogs for C20orf187 Gene

Variants for C20orf187 Gene

Sequence variations from dbSNP and Humsavar for C20orf187 Gene

SNP ID Clin Chr 20 pos Variation AA Info Type
rs1000007300 -- 10,966,419(+) T/G genic_upstream_transcript_variant, intron_variant
rs1000022579 -- 11,024,073(+) T/A intron_variant
rs1000042001 -- 11,003,637(+) A/G intron_variant
rs1000062853 -- 10,963,430(+) G/A genic_upstream_transcript_variant, intron_variant
rs1000086266 -- 10,928,620(+) G/A genic_upstream_transcript_variant, intron_variant

Variation tolerance for C20orf187 Gene

Gene Damage Index Score: 0.11; 2.40% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for C20orf187 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for C20orf187 Gene

Disorders for C20orf187 Gene

Additional Disease Information for C20orf187

No disorders were found for C20orf187 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C20orf187 Gene

Publications for C20orf187 Gene

  1. The DNA sequence and comparative analysis of human chromosome 20. (PMID: 11780052) Deloukas P … Rogers J (Nature 2001) 3 4 58
  2. Genome-wide association study identifies multiple loci associated with both mammographic density and breast cancer risk. (PMID: 25342443) Lindström S … Tamimi RM (Nature communications 2014) 3 58
  3. Genome-wide association study identifies multiple loci associated with bladder cancer risk. (PMID: 24163127) Figueroa JD … Rothman N (Human molecular genetics 2014) 3 58
  4. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 58

Products for C20orf187 Gene

Sources for C20orf187 Gene

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