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Aliases for C20orf181 Gene

Aliases for C20orf181 Gene

  • Chromosome 20 Open Reading Frame 181 2 3 5
  • Tissue Plasminogen Activator 3

External Ids for C20orf181 Gene

Previous GeneCards Identifiers for C20orf181 Gene

  • GC20M062352
  • GC20M062312
  • GC20M063154
  • GC20M063201
  • GC20M061945
  • GC20U900195
  • GC20M062463

Summaries for C20orf181 Gene

GeneCards Summary for C20orf181 Gene

C20orf181 (Chromosome 20 Open Reading Frame 181) is an Uncategorized gene.

Additional gene information for C20orf181 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C20orf181 Gene

Genomics for C20orf181 Gene

GeneHancer (GH) Regulatory Elements for C20orf181 Gene

Promoters and enhancers for C20orf181 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J063845 Enhancer 1.5 Ensembl ENCODE dbSUPER 650.7 +1.0 986 3.3 HDGF PKNOX1 FOXA2 ARNT ARID4B NEUROD1 SIN3A YBX1 FEZF1 DMAP1 C20orf181 DIDO1 MIR647 UCKL1 PCMTD2 RTEL1 TNFRSF6B ZNF512B CICP4 GMEB2
GH20J063893 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.4 -48.4 -48379 5.4 HDGF PKNOX1 CLOCK FOXA2 MLX ARID4B SIN3A DMAP1 YY1 SLC30A9 DNAJC5 RGS19 OPRL1 ZBTB46 C20orf181 FNDC11 SRMS ZBTB46-AS1 ENSG00000229299 LKAAEAR1
GH20J063694 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 11.3 +150.6 150551 7.5 HNRNPUL1 MLX ZNF48 GLIS2 ZNF207 FOS RUNX3 NFKBIZ PAF1 SP3 TNFRSF6B DIDO1 RTEL1 GMEB2 CICP4 UCKL1 MIR647 LIME1 PRPF6 YTHDF1
GH20J063872 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE dbSUPER 11.9 -25.5 -25477 2.2 CTCF JUN HLF ZSCAN4 MAX CEBPB RAD21 GABPA SP1 MAFF DNAJC5 C20orf181 MIR647 UCKL1 ZBTB46 ZBTB46-AS1 RNU1-134P FNDC11 SRMS TPD52L2
GH20J063786 Enhancer 1 Ensembl ENCODE 12.1 +61.8 61811 0.6 HDGF FOXA2 ARID4B ZNF2 ZSCAN9 RAD21 SLC30A9 ZNF143 RUNX3 THAP11 LIME1 ZBTB46 C20orf181 ENSG00000229299 SLC2A4RG ZGPAT DNAJC5 PIR49937 PIR46452
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around C20orf181 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the C20orf181 gene promoter:

Genomic Locations for C20orf181 Gene

Genomic Locations for C20orf181 Gene
chr20:63,832,609-63,848,312
(GRCh38/hg38)
Size:
15,704 bases
Orientation:
Minus strand
chr20:62,463,962-62,479,665
(GRCh37/hg19)

Genomic View for C20orf181 Gene

Genes around C20orf181 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C20orf181 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C20orf181 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C20orf181 Gene

Proteins for C20orf181 Gene

Post-translational modifications for C20orf181 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C20orf181 Gene

Domains & Families for C20orf181 Gene

Suggested Antigen Peptide Sequences for C20orf181 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for C20orf181 Gene

Function for C20orf181 Gene

Phenotypes From GWAS Catalog for C20orf181 Gene

genes like me logo Genes that share phenotypes with C20orf181: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C20orf181 Gene

Localization for C20orf181 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for C20orf181 Gene

Pathways & Interactions for C20orf181 Gene

SuperPathways for C20orf181 Gene

No Data Available

Interacting Proteins for C20orf181 Gene

Gene Ontology (GO) - Biological Process for C20orf181 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C20orf181 Gene

Drugs & Compounds for C20orf181 Gene

No Compound Related Data Available

Transcripts for C20orf181 Gene

mRNA/cDNA for C20orf181 Gene

(3) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C20orf181 Gene

Chromosome 20 open reading frame 181:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for C20orf181 Gene

No ASD Table

Relevant External Links for C20orf181 Gene

GeneLoc Exon Structure for
C20orf181
ECgene alternative splicing isoforms for
C20orf181

Expression for C20orf181 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for C20orf181 Gene

NURSA nuclear receptor signaling pathways regulating expression of C20orf181 Gene:

C20orf181

SOURCE GeneReport for Unigene cluster for C20orf181 Gene:

Hs.555583
genes like me logo Genes that share expression patterns with C20orf181: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C20orf181 Gene

Orthologs for C20orf181 Gene

Evolution for C20orf181 Gene

ENSEMBL:
Gene Tree for C20orf181 (if available)
TreeFam:
Gene Tree for C20orf181 (if available)

No data available for Orthologs for C20orf181 Gene

Paralogs for C20orf181 Gene

(1) SIMAP similar genes for C20orf181 Gene using alignment to 1 proteins:

  • Q92884_HUMAN
genes like me logo Genes that share paralogs with C20orf181: view

No data available for Paralogs for C20orf181 Gene

Variants for C20orf181 Gene

Sequence variations from dbSNP and Humsavar for C20orf181 Gene

SNP ID Clin Chr 20 pos Variation AA Info Type
rs1000771303 -- 63,846,872(-) C/T intron_variant
rs1000816689 -- 63,844,357(-) GGGACTGGAGGGGGACTGG/GGGACTGG intron_variant
rs1000869909 -- 63,848,897(-) A/G upstream_transcript_variant
rs1001161507 -- 63,845,657(-) AAAAAAA/AAAAAAAA intron_variant
rs1001597928 -- 63,846,787(-) G/C intron_variant

Additional Variant Information for C20orf181 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C20orf181

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for C20orf181 Gene

Disorders for C20orf181 Gene

Additional Disease Information for C20orf181

No disorders were found for C20orf181 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C20orf181 Gene

Publications for C20orf181 Gene

No publications were found for C20orf181 Gene.

Products for C20orf181 Gene

Sources for C20orf181 Gene

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