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Aliases for C1orf140 Gene

Subcategory (RNA class) for C1orf140 Gene


Quality Score for this RNA gene is


Aliases for C1orf140 Gene

  • Uncharacterized LOC400804 3
  • AL445470.1 5

External Ids for C1orf140 Gene

Previous GeneCards Identifiers for C1orf140 Gene

  • GC01M217892
  • GC01M219569
  • GC01M221505

Summaries for C1orf140 Gene

GeneCards Summary for C1orf140 Gene

C1orf140 (Uncharacterized LOC400804) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for C1orf140 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C1orf140 Gene

Genomics for C1orf140 Gene

GeneHancer (GH) Regulatory Elements for C1orf140 Gene

Promoters and enhancers for C1orf140 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J221334 Enhancer 1 Ensembl ENCODE 660.2 +0.6 619 2.4 FOXA2 ZSCAN4 KLF17 MZF1 FEZF1 RAD21 ZEB1 YY1 ZNF335 EGR1 C1orf140 GC01P221336 GC01M221330 LOC105372932
GH01J221315 Enhancer 0.5 ENCODE 9.8 +20.7 20722 0.2 NFYB CEBPB PRDM10 RFX5 C1orf140 LOC105372932 GC01M221330
GH01J221309 Enhancer 0.5 FANTOM5 9.7 +27.1 27059 0.2 PKNOX1 ZNF680 SCRT2 MZF1 SETDB1 C1orf140 LOC105372932 GC01M221330
GH01J221283 Enhancer 0.8 ENCODE 4.5 +52.2 52245 0.8 PKNOX1 NFIB INSM2 MZF1 ZNF195 FEZF1 GLI4 ZSCAN5C ZNF350 ZNF174 C1orf140 GC01P221297 GC01M221267
GH01J221363 Enhancer 0.4 FANTOM5 6.5 -26.9 -26921 0.4 STAT1 JUND C1orf140 HLX GC01P221336 PIR33032 LOC105372932
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around C1orf140 on UCSC Golden Path with GeneCards custom track

Genomic Locations for C1orf140 Gene

Genomic Locations for C1orf140 Gene
6,369 bases
Minus strand
6,369 bases
Minus strand

Genomic View for C1orf140 Gene

Genes around C1orf140 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C1orf140 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C1orf140 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C1orf140 Gene

Proteins for C1orf140 Gene

  • Protein details for C1orf140 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein C1orf140
    Protein Accession:
    Secondary Accessions:
    • Q6ZR57

    Protein attributes for C1orf140 Gene

    124 amino acids
    Molecular mass:
    13926 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C1orf140 Gene

Post-translational modifications for C1orf140 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C1orf140 Gene

Domains & Families for C1orf140 Gene

Protein Domains for C1orf140 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C1orf140: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C1orf140 Gene

Function for C1orf140 Gene

Phenotypes From GWAS Catalog for C1orf140 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C1orf140 Gene

Localization for C1orf140 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for C1orf140 Gene

Pathways & Interactions for C1orf140 Gene

SuperPathways for C1orf140 Gene

No Data Available

Interacting Proteins for C1orf140 Gene

Gene Ontology (GO) - Biological Process for C1orf140 Gene


No data available for Pathways by source and SIGNOR curated interactions for C1orf140 Gene

Drugs & Compounds for C1orf140 Gene

No Compound Related Data Available

Transcripts for C1orf140 Gene

mRNA/cDNA for C1orf140 Gene

(3) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(3) RNA Central transcripts :

Unigene Clusters for C1orf140 Gene

Uncharacterized LOC400804:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C1orf140 Gene

No ASD Table

Relevant External Links for C1orf140 Gene

GeneLoc Exon Structure for

Expression for C1orf140 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for C1orf140 Gene

mRNA differential expression in normal tissues according to GTEx for C1orf140 Gene

This gene is overexpressed in Artery - Tibial (x10.1).

SOURCE GeneReport for Unigene cluster for C1orf140 Gene:

genes like me logo Genes that share expression patterns with C1orf140: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C1orf140 Gene

Orthologs for C1orf140 Gene

Evolution for C1orf140 Gene

Gene Tree for C1orf140 (if available)
Gene Tree for C1orf140 (if available)

No data available for Orthologs for C1orf140 Gene

Paralogs for C1orf140 Gene

No data available for Paralogs for C1orf140 Gene

Variants for C1orf140 Gene

Sequence variations from dbSNP and Humsavar for C1orf140 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000105786 -- 221,337,371(-) G/A upstream_transcript_variant
rs1001421743 -- 221,332,290(-) A/G non_coding_transcript_variant
rs1001584064 -- 221,338,084(-) G/A upstream_transcript_variant
rs1001608420 -- 221,335,779(-) G/A intron_variant
rs1001725743 -- 221,329,435(-) A/G downstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for C1orf140 Gene

Disorders for C1orf140 Gene

Additional Disease Information for C1orf140

No disorders were found for C1orf140 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C1orf140 Gene

Publications for C1orf140 Gene

  1. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory SG … Prigmore E (Nature 2006) 4 58
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 4 58
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4 58
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for C1orf140 Gene

Sources for C1orf140 Gene

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