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Aliases for C1orf115 Gene
Aliases for C1orf115 Gene
External Ids for C1orf115 Gene
- HGNC: 25873
- Entrez Gene: 79762
- Ensembl: ENSG00000162817
- UniProtKB: Q9H7X2
Previous GeneCards Identifiers for C1orf115 Gene
- GC01P217252
- GC01P218929
- GC01P220863
- GC01P191538
Summaries for C1orf115 Gene
GeneCards Summary for C1orf115 Gene
C1orf115 (Chromosome 1 Open Reading Frame 115) is a Protein Coding gene.
Additional gene information for C1orf115 Gene
- HGNC(25873)
- Entrez Gene(79762)
- Ensembl(ENSG00000162817)
- UniProtKB(Q9H7X2)
- Open Targets Platform(ENSG00000162817)
- Search for C1orf115 at DataMed
- Search for C1orf115 at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for C1orf115 Gene
Genomics for C1orf115 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for C1orf115 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around C1orf115 on the GeneHancer Hub at the UCSC Golden Path
Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for C1orf115
- Top Transcription factor binding sites by QIAGEN in the C1orf115 gene promoter:
-
- AhR
- Arnt
- CUTL1
- E47
- FOXC1
- GATA-3
- Pax-5
- SRF
- SRF (504 AA)
Genomic Locations for C1orf115 Gene
Genomic Locations for C1orf115 Gene
- chr1:220,690,363-220,699,153
- (GRCh38/hg38)
- Size:
- 8,791 bases
- Orientation:
- Plus strand
- chr1:220,863,187-220,872,499
- (GRCh37/hg19)
- Size:
- 9,313 bases
- Orientation:
- Plus strand
Genomic View for C1orf115 Gene
Genes around C1orf115 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1q41 by HGNC
- 1q41 by Entrez Gene
- 1q41 by Ensembl
C1orf115 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for C1orf115 Gene
Proteins for C1orf115 Gene
-
Protein details for C1orf115 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q9H7X2-CA115_HUMAN
- Recommended name:
- Uncharacterized protein C1orf115
- Protein Accession:
- Q9H7X2
- B3KRN3
- D3DTB2
Protein attributes for C1orf115 Gene
- Size:
- 142 amino acids
- Molecular mass:
- 15517 Da
- Quaternary structure:
- No Data Available
Post-translational modifications for C1orf115 Gene
Other Protein References for C1orf115 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
-
Custom Antibody ServicesOriGene Antibodies for C1orf115
- Invitrogen Antibodies for C1orf115 (AFLGC-C1orf115)
- antibodies-online: Show 8 available C1ORF115 Antibodies ranked by validation data
Protein Products
-
OriGene Purified Proteins for C1orf115
- Search Origene for MassSpec and Protein Over-expression Lysates for C1orf115
- Origene Custom Protein Services for C1orf115
- Novus Biologicals lysates for C1orf115
No data available for DME Specific Peptides for C1orf115 Gene
Domains & Families for C1orf115 Gene
Gene Families for C1orf115 Gene
- Human Protein Atlas (HPA):
-
- Predicted intracellular proteins
No data available for Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for C1orf115 Gene
Function for C1orf115 Gene
Phenotypes From GWAS Catalog for C1orf115 Gene
Phenotypes for C1orf115 Gene
- GenomeRNAi human phenotypes for C1orf115:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for C1orf115 - Select products 50% OFF >
- * C1orf115 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene CRISPR knockouts for C1orf115
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for C1orf115
-
Santa Cruz Biotechnology (SCBT) CRISPR for C1orf115
miRNA for C1orf115 Gene
- miRTarBase miRNAs that target C1orf115
-
- hsa-miR-877-3p (MIRT037016)
- hsa-miR-197-3p (MIRT048087)
- hsa-miR-3152-5p (MIRT660000)
- hsa-miR-6833-3p (MIRT660001)
- hsa-miR-4768-5p (MIRT660002)
- hsa-miR-4520-3p (MIRT660003)
- hsa-miR-6836-3p (MIRT660004)
- hsa-miR-6873-3p (MIRT660005)
- hsa-miR-6881-3p (MIRT660006)
- hsa-miR-6852-3p (MIRT660007)
- hsa-miR-3909 (MIRT660008)
- hsa-miR-942-5p (MIRT660009)
- hsa-miR-4638-3p (MIRT660010)
- hsa-miR-1236-3p (MIRT660011)
- hsa-miR-6515-3p (MIRT660012)
- hsa-miR-6817-3p (MIRT660013)
- hsa-miR-7110-3p (MIRT660014)
- hsa-miR-545-3p (MIRT660016)
- hsa-miR-3120-3p (MIRT724058)
- hsa-miR-587 (MIRT724059)
- hsa-miR-3125 (MIRT739996)
- hsa-miR-3529-5p (MIRT741497)
- hsa-miR-379-5p (MIRT742779)
- hsa-miR-3916 (MIRT742893)
- hsa-miR-4428 (MIRT744299)
- hsa-miR-4451 (MIRT744700)
- hsa-miR-4476 (MIRT745029)
- hsa-miR-4533 (MIRT745997)
- hsa-miR-4536-5p (MIRT746066)
- hsa-miR-4650-3p (MIRT746506)
- hsa-miR-4683 (MIRT746932)
- hsa-miR-542-5p (MIRT750419)
- hsa-miR-6777-5p (MIRT755381)
- hsa-miR-6859-5p (MIRT757813)
- hsa-miR-6876-5p (MIRT758139)
- hsa-miR-6888-5p (MIRT758613)
- hsa-miR-6889-5p (MIRT758630)
- hsa-miR-759 (MIRT759410)
- hsa-miR-877-5p (MIRT760372)
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for C1orf115
- Browse OriGene Inhibitory RNA Products For C1orf115
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for C1orf115
Clone Products
- Applied Biological Materials (abm): Clones for C1orf115 - Select products 50% OFF >
- * C1orf115 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Sino Biological Human cDNA Clone for C1orf115
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for C1orf115
Cell Line Products
-
Horizon Cell Lines for C1orf115
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for C1orf115 Gene
Localization for C1orf115 Gene
Subcellular locations from UniProtKB/Swiss-Prot for C1orf115 Gene
- Membrane. Single-pass membrane protein.
| Compartment | Confidence |
|---|---|
| nucleus | 2 |
| mitochondrion | 1 |
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0016020 | membrane | IEA | -- |
| GO:0016021 | integral component of membrane | IEA | -- |
No data available for Subcellular locations from the Human Protein Atlas (HPA) for C1orf115 Gene
Pathways & Interactions for C1orf115 Gene
Interacting Proteins for C1orf115 Gene
No data available for Pathways by source and SIGNOR curated interactions for C1orf115 Gene
Transcripts for C1orf115 Gene
mRNA/cDNA for C1orf115 Gene
- 1 REFSEQ mRNAs :
- 8 NCBI additional mRNA sequence :
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000294889 2891 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for C1orf115 - Select products 50% OFF >
- * C1orf115 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene CRISPR knockouts for C1orf115
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for C1orf115
-
Santa Cruz Biotechnology (SCBT) CRISPR for C1orf115
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for C1orf115
- Browse OriGene Inhibitory RNA Products For C1orf115
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for C1orf115
Clone Products
- Applied Biological Materials (abm): Clones for C1orf115 - Select products 50% OFF >
- * C1orf115 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Sino Biological Human cDNA Clone for C1orf115
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for C1orf115
Relevant External Links for C1orf115 Gene
- GeneLoc Exon Structure for
- C1orf115
Expression for C1orf115 Gene
mRNA expression in embryonic tissues and stem cells from LifeMap Discovery
-
Inner Cell Mass (Early Embryonic Tissues)
- Inner Cell Mass Cells Inner Cell Mass
-
Placenta (Extraembryonic Tissues)
mRNA differential expression in normal tissues according to GTEx for C1orf115 Gene
This gene is overexpressed in Brain - Cortex (x4.3), Brain - Frontal Cortex (BA9) (x4.2), and Liver (x4.1).
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for C1orf115
SOURCE GeneReport for Unigene cluster for C1orf115 Gene:
Hs.519839Evidence on tissue expression from TISSUES for C1orf115 Gene
- Nervous system(4.7)
- Kidney(4.4)
- Liver(2.2)
Primer Products
-
OriGene qPCR primer pairs for C1orf115
-
OriGene qPCR primer pairs and template standards for C1orf115
Gene Expression Assay Products
No data available for Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for C1orf115 Gene
Orthologs for C1orf115 Gene
This gene was present in the common ancestor of mammals.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| Chimpanzee (Pan troglodytes) |
Mammalia | C1H1orf115 30 |
|
||
| C1orf115 31 |
|
OneToOne | |||
| Dog (Canis familiaris) |
Mammalia | C1orf115 31 |
|
OneToOne | |
| Cow (Bos Taurus) |
Mammalia | C16H1orf115 30 31 |
|
OneToOne | |
| Rat (Rattus norvegicus) |
Mammalia | RGD1310587 30 |
|
||
| Mouse (Mus musculus) |
Mammalia | C130074G19Rik 30 17 31 |
|
OneToOne | |
| Oppossum (Monodelphis domestica) |
Mammalia | C1orf115 31 |
|
OneToOne | |
| Platypus (Ornithorhynchus anatinus) |
Mammalia | C1orf115 31 |
|
OneToOne |
- Species where no ortholog for C1orf115 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Eremothecium gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- Alpha proteobacteria (Wolbachia pipientis)
- Amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- Baker's yeast (Saccharomyces cerevisiae)
- Barley (Hordeum vulgare)
- Beta proteobacteria (Neisseria meningitidis)
- Bread mold (Neurospora crassa)
- Chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- Common water flea (Daphnia pulex)
- Corn (Zea mays)
- E. coli (Escherichia coli)
- Filamentous fungi (Aspergillus nidulans)
- Firmicute Bacteria (Streptococcus pneumoniae)
- Fission Yeast (Schizosaccharomyces pombe)
- Fruit Fly (Drosophila melanogaster)
- Green Algae (Chlamydomonas reinhardtii)
- Honey Bee (Apis mellifera)
- K. Lactis Yeast (Kluyveromyces lactis)
- Lizard (Anolis carolinensis)
- Loblloly Pine (Pinus taeda)
- Malaria Parasite (Plasmodium falciparum)
- Medicago Trunc (Medicago Truncatula)
- Moss (Physcomitrella patens)
- Orangutan (Pongo pygmaeus)
- Pig (Sus scrofa)
- Rainbow Trout (Oncorhynchus mykiss)
- Rice (Oryza sativa)
- Rice Blast Fungus (Magnaporthe grisea)
- Schistosome Parasite (Schistosoma mansoni)
- Sea Anemone (Nematostella vectensis)
- Sea Vase (Ciona intestinalis)
- Sea Squirt (Ciona savignyi)
- Sea Urchin (Strongylocentrotus purpuratus)
- Sorghum (Sorghum bicolor)
- Soybean (Glycine max)
- Stem Rust Fungus (Puccinia graminis)
- Sugarcane (Saccharum officinarum)
- Thale Cress (Arabidopsis thaliana)
- Tomato (Lycopersicon esculentum)
- Toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- Tropical Clawed Frog (Silurana tropicalis)
- Wheat (Triticum aestivum)
- Worm (Caenorhabditis elegans)
- Zebrafish (Danio rerio)
Paralogs for C1orf115 Gene
No data available for Paralogs for C1orf115 Gene
Variants for C1orf115 Gene
Gene Damage Index Score:
1.02;
20.85% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for C1orf115 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- C1orf115
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for C1orf115 Gene
Disorders for C1orf115 Gene
Additional Disease Information for C1orf115
- Genetic Association Database
- (GAD)
- ATLAS of Genetics and Cytogenetics in Oncology and Haematology
- Open Targets Platform
No disorders were found for C1orf115 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C1orf115 Gene
Publications for C1orf115 Gene
- Systematic functional identification of cancer multi-drug resistance genes. (PMID: 32028983) Lau MT … Neely GG (Genome biology 2020) 2 3
- The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory SG … Prigmore E (Nature 2006) 3 4
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3
ExternalLinks
Products for C1orf115 Gene
- Custom Antibody ServicesOriGene Antibodies for C1orf115
- Browse OriGene ELISA Kits
- Custom Assay Services
- OriGene Purified Proteins for C1orf115
- Search Origene for MassSpec and Protein Over-expression Lysates for C1orf115
- Origene Custom Protein Services for C1orf115
- Origene shrna, sirna, and RNAi products in human, mouse, rat for C1orf115
- Browse OriGene Inhibitory RNA Products For C1orf115
- OriGene qPCR primer pairs for C1orf115
- OriGene qPCR primer pairs and template standards for C1orf115
- OriGene CRISPR knockouts for C1orf115
- OriGene ORF clones in human for C1orf115
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For C1orf115
- Sino Biological Human cDNA Clone for C1orf115
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse cDNA Clones
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Novus Biologicals lysates for C1orf115
- Browse Antibodies
- Browse Peptides and Proteins
- Browse Lysates
- Browse ELISA Kits
- Invitrogen Antibodies for C1orf115 (AFLGC-C1orf115)
- VectorBuilder Custom and pre-made DNA vectors for C1orf115 (ie. gene expression, shRNA knockdown, CRISPR)
- VectorBuilder Viral vectors for C1orf115 (ie. lentivirus, AAV, adenovirus)
- VectorBuilder CRISPR vectors for C1orf115 (ie. knockout, knockin, CRISPRa, CRISPRi)
- VectorBuilder Virus packaging for C1orf115 CRISPR vectors (ie. lentivirus, AAV, adenovirus)
- VectorBuilder Stable cell line generation for C1orf115
- antibodies-online: Show 8 available C1ORF115 Antibodies ranked by validation data
- antibodies-online: Search results for available C1ORF115 related products ranked by validation data
- antibodies-online: Search results for available C1ORF115 related products ranked by validation data
- Horizon Cell Lines for C1orf115
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for C1orf115
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for C1orf115
- Search GeneCopoeia for miRNA 3'UTR Target clone products for C1orf115
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for C1orf115
Sources for C1orf115 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB