Aliases for C19orf44 Gene
Aliases for C19orf44 Gene
External Ids for C19orf44 Gene
- HGNC: 26141
- Entrez Gene: 84167
- Ensembl: ENSG00000105072
- UniProtKB: Q9H6X5
Previous GeneCards Identifiers for C19orf44 Gene
- GC19P016469
- GC19P016607
- GC19P016175
- GC19P016578
- GC19P016816
- GC19P017593
- GC19P018261
- GC19P018663
- GC19P018969
- GC19P019295
- GC19P019623
Summaries for C19orf44 Gene
GeneCards Summary for C19orf44 Gene
C19orf44 (Chromosome 19 Open Reading Frame 44) is a Protein Coding gene.
Additional gene information for C19orf44 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C19orf44 Gene
Genomics for C19orf44 Gene
GeneHancer (GH) Regulatory Elements for C19orf44 Gene
Promoters and enhancers for C19orf44 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)
GeneHancers around C19orf44 on UCSC Golden Path with GeneCards custom track
- Top Transcription factor binding sites by QIAGEN in the C19orf44 gene promoter:
-
- Pax-4a
- MEF-2A
- MEF-2
- aMEF-2
- POU2F1
- POU2F1a
- E47
- Hand1
- CUTL1
Regulatory Element Products
Genomic Locations for C19orf44 Gene
Genomic Locations for C19orf44 Gene
- chr19:16,496,311-16,521,369
- (GRCh38/hg38)
- Size:
- 25,059 bases
- Orientation:
- Plus strand
- chr19:16,607,122-16,632,163
- (GRCh37/hg19)
- Size:
- 25,042 bases
- Orientation:
- Plus strand
Genomic View for C19orf44 Gene
Genes around C19orf44 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 19p13.11 by Entrez Gene
- 19p13.11 by HGNC
- 19p13.11 by Ensembl
C19orf44 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for C19orf44 Gene
Proteins for C19orf44 Gene
-
Protein details for C19orf44 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q9H6X5-CS044_HUMAN
- Recommended name:
- Uncharacterized protein C19orf44
- Protein Accession:
- Q9H6X5
- Q8N6Y7
Protein attributes for C19orf44 Gene
- Size:
- 657 amino acids
- Molecular mass:
- 71343 Da
- Quaternary structure:
- No Data Available
Protein Expression for C19orf44 Gene
Post-translational modifications for C19orf44 Gene
Other Protein References for C19orf44 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
-
Custom Antibody ServicesOriGene Antibodies for C19orf44
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-
Boster Bio Antibodies for C19orf44
Protein Products
-
OriGene Purified Proteins for C19orf44
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Assay Products
No data available for DME Specific Peptides for C19orf44 Gene
Domains & Families for C19orf44 Gene
Gene Families for C19orf44 Gene
- Human Protein Atlas (HPA):
-
- Predicted intracellular proteins
Graphical View of Domain Structure for InterPro Entry
No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C19orf44 Gene
Function for C19orf44 Gene
Phenotypes From GWAS Catalog for C19orf44 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005515 | protein binding | IPI | 25416956 |
Phenotypes for C19orf44 Gene
- GenomeRNAi human phenotypes for C19orf44:
-
- Decreased viability
- no effect
- Increased vaccinia virus (VACV) infection
- Decreased JFH-1 genotype 2a Hepatitis C virus (HCV) infection after direct virus infection
- Decreased JFH-1 genotype 2a Hepatitis C virus (HCV) infection after viral supernatant infection
- Decreased JFH-1 genotype 2a Hepatitis C virus (HCV) infection
Animal Model Products
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-
CRISPR Products
-
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- Applied Biological Materials CRISPR for C19orf44
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for C19orf44
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miRNA for C19orf44 Gene
- miRTarBase miRNAs that target C19orf44
-
- hsa-mir-548aw (MIRT669274)
- hsa-mir-1468-3p (MIRT669275)
- hsa-mir-548x-5p (MIRT669276)
- hsa-mir-548g-5p (MIRT669277)
- hsa-mir-548f-5p (MIRT669278)
- hsa-mir-548aj-5p (MIRT669279)
- hsa-mir-8063 (MIRT669280)
- hsa-mir-141-5p (MIRT669281)
- hsa-mir-5003-3p (MIRT669282)
- hsa-mir-4662b (MIRT669283)
- hsa-mir-4647 (MIRT669284)
- hsa-mir-4426 (MIRT669285)
miRNA Products
Inhibitory RNA Products
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Clone Products
- Sino Biological Human cDNA Clone for C19orf44
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-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Cell Line Products
-
Horizon Cell Lines for C19orf44
No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for C19orf44 Gene
Localization for C19orf44 Gene
| Compartment | Confidence |
|---|---|
| nucleus | 3 |
| cytosol | 3 |
- Nuclear bodies (2)
- Nucleus (2)
No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C19orf44 Gene
Pathways & Interactions for C19orf44 Gene
No Data Available
Interacting Proteins for C19orf44 Gene
No data available for Pathways by source and SIGNOR curated interactions for C19orf44 Gene
Transcripts for C19orf44 Gene
mRNA/cDNA for C19orf44 Gene
- (5) REFSEQ mRNAs :
- (7) Additional mRNA sequences :
- (55) Selected AceView cDNA sequences:
- (8) Ensembl transcripts including schematic representations, and UCSC links where relevant :
-
- ENST00000221671 3427 bps (uc002neh.3)
- ENST00000594035 2609 bps (uc002neg.5)
- ENST00000596592 1071 bps (uc060uzd.1)
- ENST00000593380 3248 bps (uc060uze.1)
- ENST00000599550 569 bps (uc060uzf.1)
Unigene Clusters for C19orf44 Gene
CRISPR Products
-
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- Applied Biological Materials CRISPR for C19orf44
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for C19orf44
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miRNA Products
Inhibitory RNA Products
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Clone Products
- Sino Biological Human cDNA Clone for C19orf44
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- Applied Biological Materials Clones for C19orf44
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
| ExUns: | 1 | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5 | ^ | 6a | · | 6b | ^ | 7a | · | 7b | · | 7c | ^ | 8 | ^ | 9a | · | 9b | ^ | 10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SP1: | |||||||||||||||||||||||||||
| SP2: | |||||||||||||||||||||||||||
| SP3: | - | ||||||||||||||||||||||||||
| SP4: | - | - | |||||||||||||||||||||||||
| SP5: |
Expression for C19orf44 Gene
This gene is overexpressed in Heart (39.1) and Lung (29.9).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for C19orf44 Gene
- Elite partner
NURSA nuclear receptor signaling pathways regulating expression of C19orf44 Gene:
C19orf44SOURCE GeneReport for Unigene cluster for C19orf44 Gene:
Hs.631627Evidence on tissue expression from TISSUES for C19orf44 Gene
- Nervous system(2.2)
Primer Products
-
OriGene qPCR primer pairs for C19orf44
- genomics-online: primer clones - Search results for 39 available C19ORF44 gene related products
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Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for C19orf44 Gene
Orthologs for C19orf44 Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | C19H19orf44 33 |
|
||
| C19orf44 34 |
|
OneToOne | |||
| cow (Bos Taurus) |
Mammalia | C7H19orf44 33 |
|
||
| C19orf44 34 |
|
OneToOne | |||
| dog (Canis familiaris) |
Mammalia | C20H19orf44 33 |
|
||
| C19orf44 34 |
|
OneToOne | |||
| rat (Rattus norvegicus) |
Mammalia | RGD1311847 33 |
|
||
| mouse (Mus musculus) |
Mammalia | 1700030K09Rik 16 34 33 |
|
||
| oppossum (Monodelphis domestica) |
Mammalia | C19orf44 34 |
|
OneToOne | |
| platypus (Ornithorhynchus anatinus) |
Mammalia | C19orf44 34 |
|
OneToOne | |
| chicken (Gallus gallus) |
Aves | C19orf44 34 |
|
OneToOne | |
| lizard (Anolis carolinensis) |
Reptilia | C19orf44 34 |
|
OneToOne | |
| zebrafish (Danio rerio) |
Actinopterygii | C22H19orf44 34 |
|
OneToOne | |
| sea squirt (Ciona savignyi) |
Ascidiacea | -- 34 |
|
OneToOne |
- Species where no ortholog for C19orf44 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rainbow trout (Oncorhynchus mykiss)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
Paralogs for C19orf44 Gene
No data available for Paralogs for C19orf44 Gene
Variants for C19orf44 Gene
| SNP ID | Clin | Chr 19 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1060502978 | uncertain-significance, Familial hypertrophic cardiomyopathy 19 | 16,495,763(+) | C/T | upstream_transcript_variant | |
| rs144355944 | benign, Familial hypertrophic cardiomyopathy 19 | 16,495,848(+) | A/G | upstream_transcript_variant | |
| rs149634686 | benign, Familial hypertrophic cardiomyopathy 19 | 16,495,819(+) | T/C | upstream_transcript_variant | |
| rs368506422 | uncertain-significance, Primary dilated cardiomyopathy | 16,496,063(+) | A/T | upstream_transcript_variant | |
| rs370721650 | benign, Familial hypertrophic cardiomyopathy 19 | 16,496,070(+) | G/A/C/T | upstream_transcript_variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| esv3370089 | CNV | insertion | 20981092 |
Residual Variation Intolerance Score:
13.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
1.06;
21.62% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for C19orf44 Gene
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C19orf44 Gene
Disorders for C19orf44 Gene
Additional Disease Information for C19orf44
No disorders were found for C19orf44 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C19orf44 Gene
Publications for C19orf44 Gene
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 58
- Architecture of the human interactome defines protein communities and disease networks. (PMID: 28514442) Huttlin EL … Harper JW (Nature 2017) 3 58
- RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. (PMID: 29117863) Choudhury NR … Michlewski G (BMC biology 2017) 3 58
- A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. (PMID: 26673895) Kırlı K … Görlich D (eLife 2015) 3 58
- A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T … Vidal M (Cell 2014) 3 58
Products for C19orf44 Gene
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Sources for C19orf44 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
- (159) GlyConnect
- (160) Aminode
- (161) GeneCopoeia
- (162) GPS-Prot
- (163) RNACentral
- (164) LncRNADisease
- (165) LOVD
- (166) miR2Disease
- (167) DiseaseEnhancer
- (168) Boster Bio
- (169) Biorbyt