Aliases for C18orf12 Gene

Aliases for C18orf12 Gene

  • Chromosome 18 Open Reading Frame 12 2 3 5
  • Uncharacterized Protein C18orf12 3 4
  • Protein HEIL1 4
  • HsT2508 3
  • HEIL1 3

External Ids for C18orf12 Gene

Previous GeneCards Identifiers for C18orf12 Gene

  • GC18P044030
  • GC18U900187
  • GC18P045778

Summaries for C18orf12 Gene

GeneCards Summary for C18orf12 Gene

C18orf12 (Chromosome 18 Open Reading Frame 12) is a Protein Coding gene.

Additional gene information for C18orf12 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for C18orf12 Gene

Genomics for C18orf12 Gene

GeneHancer (GH) Regulatory Elements for C18orf12 Gene

Promoters and enhancers for C18orf12 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J048222 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.3 -26.0 -25995 9.8 HNRNPK CTCF ZNF300 REST RAD21 SMC3 MXI1 ESRRA RXRA NFIC RNU6-708P C18orf12 RF00026-487 ZBTB7C lnc-SMAD2-3
GH18J048264 Enhancer 0.7 Ensembl ENCODE 0.4 +12.1 12120 1.2 RFX1 MXI1 ZNF316 MAFF MAFK MAFG CHD2 EMSY C18orf12 ZBTB7C lnc-SMAD2-3
GH18J048216 Enhancer 0.9 Ensembl ENCODE 0.3 -35.4 -35405 2.2 ZNF639 ZIC2 ATF2 SP2 ZBTB17 ZBTB11 ZNF335 ZNF189 ZSCAN23 ZNF843 C18orf12 RF00026-487 RNU6-708P ZBTB7C lnc-SMAD2-3
GH18J048293 Enhancer 0.8 Ensembl ENCODE 0.3 +41.8 41804 4.2 CTCF USF1 TEAD4 ZNF316 MAFF MAFK POLR2A PBX2 SPI1 KLF17 ZBTB7C C18orf12 lnc-SMAD2-3
GH18J048185 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.2 -65.8 -65796 1.8 EP300 RFX1 MXI1 FOS CEBPB ZFHX2 RFX5 SMARCA4 EGR2 POLR2A RF00026-487 RNU6-708P C18orf12 ZBTB7C lnc-SMAD2-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around C18orf12 on UCSC Golden Path with GeneCards custom track

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for C18orf12

Top Transcription factor binding sites by QIAGEN in the C18orf12 gene promoter:
  • ATF
  • ATF-2
  • C/EBPalpha
  • Cart-1
  • CREB
  • CUTL1
  • HNF-1
  • HNF-1A
  • Nkx2-5

Genomic Locations for C18orf12 Gene

Genomic Locations for C18orf12 Gene
chr18:48,252,296-48,252,837
(GRCh38/hg38)
Size:
542 bases
Orientation:
Plus strand
chr18:45,778,672-45,779,208
(GRCh37/hg19)
Size:
537 bases
Orientation:
Plus strand

Genomic View for C18orf12 Gene

Genes around C18orf12 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C18orf12 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C18orf12 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C18orf12 Gene

Proteins for C18orf12 Gene

  • Protein details for C18orf12 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96KH6-CR012_HUMAN
    Recommended name:
    Uncharacterized protein C18orf12
    Protein Accession:
    Q96KH6

    Protein attributes for C18orf12 Gene

    Size:
    178 amino acids
    Molecular mass:
    19680 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C18orf12 Gene

Post-translational modifications for C18orf12 Gene

No Post-translational modifications

Other Protein References for C18orf12 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for C18orf12 Gene

Domains & Families for C18orf12 Gene

Protein Domains for C18orf12 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for C18orf12 Gene

GenScript: Design optimal peptide antigens:
  • Protein HEIL1 (CR012_HUMAN)
genes like me logo Genes that share domains with C18orf12: view

No data available for Gene Families , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for C18orf12 Gene

Function for C18orf12 Gene

Phenotypes From GWAS Catalog for C18orf12 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C18orf12 Gene

Localization for C18orf12 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for C18orf12 Gene

Pathways & Interactions for C18orf12 Gene

PathCards logo

SuperPathways for C18orf12 Gene

No Data Available

Interacting Proteins for C18orf12 Gene

;

Gene Ontology (GO) - Biological Process for C18orf12 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C18orf12 Gene

Drugs & Compounds for C18orf12 Gene

No Compound Related Data Available

Transcripts for C18orf12 Gene

mRNA/cDNA for C18orf12 Gene

2 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for C18orf12 Gene

No ASD Table

Relevant External Links for C18orf12 Gene

GeneLoc Exon Structure for
C18orf12

Expression for C18orf12 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for C18orf12 Gene

mRNA differential expression in normal tissues according to GTEx for C18orf12 Gene

This gene is overexpressed in Testis (x42.6), Cervix - Endocervix (x5.3), and Nerve - Tibial (x5.1).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for C18orf12

SOURCE GeneReport for Unigene cluster for C18orf12 Gene:

Hs.334493
genes like me logo Genes that share expression patterns with C18orf12: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C18orf12 Gene

Orthologs for C18orf12 Gene

Evolution for C18orf12 Gene

ENSEMBL:
Gene Tree for C18orf12 (if available)
TreeFam:
Gene Tree for C18orf12 (if available)

No data available for Orthologs for C18orf12 Gene

Paralogs for C18orf12 Gene

No data available for Paralogs for C18orf12 Gene

Variants for C18orf12 Gene

Additional dbSNP identifiers (rs#s) for C18orf12 Gene

Additional Variant Information for C18orf12 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C18orf12

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for C18orf12 Gene

Disorders for C18orf12 Gene

Additional Disease Information for C18orf12

No disorders were found for C18orf12 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C18orf12 Gene

Publications for C18orf12 Gene

  1. Genome-wide association study in Han Chinese identifies three novel loci for human height. (PMID: 23456168) Hao Y … Gu D (Human genetics 2013) 3 54

Products for C18orf12 Gene

Sources for C18orf12 Gene