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Aliases for C17orf98 Gene
Aliases for C17orf98 Gene
External Ids for C17orf98 Gene
- HGNC: 34492
- Entrez Gene: 388381
- Ensembl: ENSG00000275489
- UniProtKB: A8MV24
Previous GeneCards Identifiers for C17orf98 Gene
- GC17M034245
- GC17M036991
- GC17M032786
- GC17M038834
- GC17M038849
- GC17M038850
- GC17M038862
- GC17M038889
- GC17M038836
- GC17M038837
- GC17M038838
- GC17M038839
- GC17M038840
- GC17M038845
- GC17M038846
- GC17M038848
Summaries for C17orf98 Gene
GeneCards Summary for C17orf98 Gene
C17orf98 (Chromosome 17 Open Reading Frame 98) is a Protein Coding gene.
Additional gene information for C17orf98 Gene
- HGNC(34492)
- Entrez Gene(388381)
- Ensembl(ENSG00000275489)
- UniProtKB(A8MV24)
- Open Targets Platform(ENSG00000275489)
- Search for C17orf98 at DataMed
- Search for C17orf98 at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for C17orf98 Gene
Genomics for C17orf98 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for C17orf98 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around C17orf98 on the GeneHancer Hub at the UCSC Golden Path
Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for C17orf98
- Top Transcription factor binding sites by QIAGEN in the C17orf98 gene promoter:
-
- CREB
- deltaCREB
- GATA-1
- N-Myc
- NF-kappaB
- NF-kappaB1
- Nkx2-5
- RelA
Genomic Locations for C17orf98 Gene
Genomic Locations for C17orf98 Gene
- chr17:38,835,086-38,841,455
- (GRCh38/hg38)
- Size:
- 6,370 bases
- Orientation:
- Minus strand
- chr17:36,991,341-36,997,708
- (GRCh37/hg19)
- Size:
- 6,368 bases
- Orientation:
- Minus strand
Genomic View for C17orf98 Gene
Genes around C17orf98 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 17q12 by HGNC
- 17q12 by Entrez Gene
- 17q12 by Ensembl
C17orf98 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for C17orf98 Gene
Proteins for C17orf98 Gene
-
Protein details for C17orf98 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- A8MV24-CQ098_HUMAN
- Recommended name:
- Uncharacterized protein C17orf98
- Protein Accession:
- A8MV24
Protein attributes for C17orf98 Gene
- Size:
- 154 amino acids
- Molecular mass:
- 17565 Da
- Quaternary structure:
- No Data Available
Post-translational modifications for C17orf98 Gene
No Post-translational modifications
Other Protein References for C17orf98 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
- Novus Biologicals Antibodies for C17orf98
- Invitrogen Antibodies for C17orf98 (AFLGC-C17orf98)
Protein Products
-
OriGene Purified Proteins for C17orf98
- Search Origene for MassSpec and Protein Over-expression Lysates for C17orf98
- Origene Custom Protein Services for C17orf98
- Novus Biologicals proteins for C17orf98
No data available for DME Specific Peptides for C17orf98 Gene
Domains & Families for C17orf98 Gene
Gene Families for C17orf98 Gene
- Human Protein Atlas (HPA):
-
- Predicted intracellular proteins
No data available for Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for C17orf98 Gene
Function for C17orf98 Gene
Phenotypes From GWAS Catalog for C17orf98 Gene
Phenotypes for C17orf98 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for C17orf98 - Select products 50% OFF >
- * C17orf98 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene CRISPR knockouts for C17orf98
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for C17orf98
-
Santa Cruz Biotechnology (SCBT) CRISPR for C17orf98
miRNA for C17orf98 Gene
- miRTarBase miRNAs that target C17orf98
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for C17orf98
- Browse OriGene Inhibitory RNA Products For C17orf98
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for C17orf98
Clone Products
- Applied Biological Materials (abm): Clones for C17orf98 - Select products 50% OFF >
- * C17orf98 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene ORF clones in human for C17orf98
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Sino Biological Human cDNA Clone for C17orf98
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for C17orf98
Cell Line Products
-
Horizon Cell Lines for C17orf98
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for C17orf98 Gene
Localization for C17orf98 Gene
| Compartment | Confidence |
|---|---|
| extracellular | 1 |
| mitochondrion | 1 |
| nucleus | 1 |
| cytosol | 1 |
- Intermediate filaments (2)
- Nucleoli (2)
No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C17orf98 Gene
Transcripts for C17orf98 Gene
mRNA/cDNA for C17orf98 Gene
- 1 REFSEQ mRNAs :
- 2 NCBI additional mRNA sequence :
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000614158 632 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for C17orf98 - Select products 50% OFF >
- * C17orf98 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene CRISPR knockouts for C17orf98
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for C17orf98
-
Santa Cruz Biotechnology (SCBT) CRISPR for C17orf98
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for C17orf98
- Browse OriGene Inhibitory RNA Products For C17orf98
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for C17orf98
Clone Products
- Applied Biological Materials (abm): Clones for C17orf98 - Select products 50% OFF >
- * C17orf98 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene ORF clones in human for C17orf98
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Sino Biological Human cDNA Clone for C17orf98
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for C17orf98
Relevant External Links for C17orf98 Gene
- GeneLoc Exon Structure for
- C17orf98
Expression for C17orf98 Gene
mRNA expression in embryonic tissues and stem cells from LifeMap Discovery
- Inner Cell Mass (Early Embryonic Tissues)
mRNA differential expression in normal tissues according to GTEx for C17orf98 Gene
This gene is overexpressed in Testis (x48.3).
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for C17orf98
SOURCE GeneReport for Unigene cluster for C17orf98 Gene:
Hs.250182Primer Products
-
OriGene qPCR primer pairs for C17orf98
Gene Expression Assay Products
No data available for Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C17orf98 Gene
Orthologs for C17orf98 Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| Chimpanzee (Pan troglodytes) |
Mammalia | C17H17orf98 30 |
|
||
| Dog (Canis familiaris) |
Mammalia | C9H17orf98 30 |
|
||
| Cow (Bos Taurus) |
Mammalia | C19H17orf98 30 |
|
||
| Rat (Rattus norvegicus) |
Mammalia | LOC691189 30 |
|
||
| Mouse (Mus musculus) |
Mammalia | 1700001P01Rik 30 17 |
|
||
| Tropical Clawed Frog (Silurana tropicalis) |
Amphibia | LOC100494322 30 |
|
- Species where no ortholog for C17orf98 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Eremothecium gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- Alpha proteobacteria (Wolbachia pipientis)
- Amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- Baker's yeast (Saccharomyces cerevisiae)
- Barley (Hordeum vulgare)
- Beta proteobacteria (Neisseria meningitidis)
- Bread mold (Neurospora crassa)
- Chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- Common water flea (Daphnia pulex)
- Corn (Zea mays)
- E. coli (Escherichia coli)
- Filamentous fungi (Aspergillus nidulans)
- Firmicute Bacteria (Streptococcus pneumoniae)
- Fission Yeast (Schizosaccharomyces pombe)
- Fruit Fly (Drosophila melanogaster)
- Green Algae (Chlamydomonas reinhardtii)
- Honey Bee (Apis mellifera)
- K. Lactis Yeast (Kluyveromyces lactis)
- Lizard (Anolis carolinensis)
- Loblloly Pine (Pinus taeda)
- Malaria Parasite (Plasmodium falciparum)
- Medicago Trunc (Medicago Truncatula)
- Moss (Physcomitrella patens)
- Oppossum (Monodelphis domestica)
- Orangutan (Pongo pygmaeus)
- Pig (Sus scrofa)
- Platypus (Ornithorhynchus anatinus)
- Rainbow Trout (Oncorhynchus mykiss)
- Rice (Oryza sativa)
- Rice Blast Fungus (Magnaporthe grisea)
- Schistosome Parasite (Schistosoma mansoni)
- Sea Anemone (Nematostella vectensis)
- Sea Vase (Ciona intestinalis)
- Sea Squirt (Ciona savignyi)
- Sea Urchin (Strongylocentrotus purpuratus)
- Sorghum (Sorghum bicolor)
- Soybean (Glycine max)
- Stem Rust Fungus (Puccinia graminis)
- Sugarcane (Saccharum officinarum)
- Thale Cress (Arabidopsis thaliana)
- Tomato (Lycopersicon esculentum)
- Toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- Wheat (Triticum aestivum)
- Worm (Caenorhabditis elegans)
- Zebrafish (Danio rerio)
Paralogs for C17orf98 Gene
Pseudogenes.org Pseudogenes for C17orf98 Gene
No data available for Paralogs for C17orf98 Gene
Variants for C17orf98 Gene
Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for C17orf98 Gene
| SNP ID | Clinical significance and condition | Chr 17 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs7210156 | - | p.Pro61Leu |
Residual Variation Intolerance Score:
64.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
5.22;
69.93% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for C17orf98 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- C17orf98
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C17orf98 Gene
Disorders for C17orf98 Gene
Additional Disease Information for C17orf98
No disorders were found for C17orf98 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C17orf98 Gene
Publications for C17orf98 Gene
- DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. (PMID: 16625196) Zody MC … Nusbaum C (Nature 2006) 2 3 4
ExternalLinks
Products for C17orf98 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- OriGene Purified Proteins for C17orf98
- Search Origene for MassSpec and Protein Over-expression Lysates for C17orf98
- Origene Custom Protein Services for C17orf98
- Origene shrna, sirna, and RNAi products in human, mouse, rat for C17orf98
- Browse OriGene Inhibitory RNA Products For C17orf98
- OriGene qPCR primer pairs for C17orf98
- OriGene CRISPR knockouts for C17orf98
- OriGene ORF clones in human for C17orf98
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For C17orf98
- Sino Biological Human cDNA Clone for C17orf98
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse cDNA Clones
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Novus Biologicals Antibodies for C17orf98
- Novus Biologicals proteins for C17orf98
- Browse Antibodies
- Browse Peptides and Proteins
- Browse Lysates
- Browse ELISA Kits
- Invitrogen Antibodies for C17orf98 (AFLGC-C17orf98)
- VectorBuilder Custom and pre-made DNA vectors for C17orf98 (ie. gene expression, shRNA knockdown, CRISPR)
- VectorBuilder Viral vectors for C17orf98 (ie. lentivirus, AAV, adenovirus)
- VectorBuilder CRISPR vectors for C17orf98 (ie. knockout, knockin, CRISPRa, CRISPRi)
- VectorBuilder Virus packaging for C17orf98 CRISPR vectors (ie. lentivirus, AAV, adenovirus)
- VectorBuilder Stable cell line generation for C17orf98
- Horizon Cell Lines for C17orf98
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for C17orf98
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for C17orf98
- Search GeneCopoeia for miRNA 3'UTR Target clone products for C17orf98
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for C17orf98
Sources for C17orf98 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB