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Aliases for C17orf113 Gene

Aliases for C17orf113 Gene

  • Chromosome 17 Open Reading Frame 113 2 3 5

External Ids for C17orf113 Gene

Summaries for C17orf113 Gene

GeneCards Summary for C17orf113 Gene

C17orf113 (Chromosome 17 Open Reading Frame 113) is a Protein Coding gene.

Additional gene information for C17orf113 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C17orf113 Gene

Genomics for C17orf113 Gene

GeneHancer (GH) Regulatory Elements for C17orf113 Gene

Promoters and enhancers for C17orf113 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I042050 Promoter/Enhancer 1.3 Ensembl ENCODE 550.8 +0.1 113 1 RB1 ZNF76 SIN3A DMAP1 ZNF48 RAD21 YY1 ETS1 ZNF335 GLIS2 C17orf113 DNAJC7 NKIRAS2 DHX58 CNP RAB5C HCRT KCNH4 NT5C3B PIR44940
GH17I042049 Enhancer 0.2 FANTOM5 550.8 +1.5 1461 0.2 C17orf113 CNP DNAJC7 NKIRAS2 DHX58 RAB5C HCRT KCNH4 PIR44940 ZNF385C
GH17I042222 Enhancer 1 ENCODE dbSUPER 11.2 -171.7 -171744 0.2 HDAC1 HDGF YBX3 ZSCAN4 NFXL1 RAD21 ZNF280A POLR2B ZNF354C ARID2 ENSG00000267340 ENSG00000267002 NBR2 CNTNAP1 ENSG00000267765 TUBG2 CNTD1 NKIRAS2 KAT2A JUP
GH17I041649 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 5.4 +396.0 395968 9.8 HDGF ARNT ZNF133 NEUROD1 YBX1 BRCA1 TCF12 GLIS2 ZNF143 ZNF207 ENSG00000267758 JUP HSD17B1 DHX58 GHDC ENSG00000259623 KRT14 CNP PSMC3IP RETREG3
GH17I041645 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 4.4 +404.7 404729 1.3 HDAC1 HDGF ATF1 NFRKB ARID2 ATF7 CREM SMARCC1 ZNF592 MAFF EIF1 C17orf113 DHX58 NKIRAS2 KRT42P ENSG00000278954
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around C17orf113 on UCSC Golden Path with GeneCards custom track

Genomic Locations for C17orf113 Gene

Genomic Locations for C17orf113 Gene
chr17:42,038,232-42,050,614
(GRCh38/hg38)
Size:
12,383 bases
Orientation:
Minus strand
chr17:40,191,723-40,195,394
(GRCh37/hg19)

Genomic View for C17orf113 Gene

Genes around C17orf113 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C17orf113 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C17orf113 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for C17orf113 Gene

Proteins for C17orf113 Gene

  • Protein details for C17orf113 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A0A1B0GUU1-CQ113_HUMAN
    Recommended name:
    Transmembrane protein C17orf113
    Protein Accession:
    A0A1B0GUU1

    Protein attributes for C17orf113 Gene

    Size:
    675 amino acids
    Molecular mass:
    72432 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C17orf113 Gene

Post-translational modifications for C17orf113 Gene

No Post-translational modifications

Other Protein References for C17orf113 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C17orf113 Gene

Domains & Families for C17orf113 Gene

Protein Domains for C17orf113 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C17orf113: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C17orf113 Gene

Function for C17orf113 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C17orf113 Gene

Localization for C17orf113 Gene

Subcellular locations from UniProtKB/Swiss-Prot for C17orf113 Gene

Membrane; Single-pass membrane protein.

Gene Ontology (GO) - Cellular Components for C17orf113 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with C17orf113: view

No data available for Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for C17orf113 Gene

Pathways & Interactions for C17orf113 Gene

SuperPathways for C17orf113 Gene

No Data Available

Interacting Proteins for C17orf113 Gene

Gene Ontology (GO) - Biological Process for C17orf113 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C17orf113 Gene

Drugs & Compounds for C17orf113 Gene

No Compound Related Data Available

Transcripts for C17orf113 Gene

mRNA/cDNA for C17orf113 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for C17orf113 Gene

No ASD Table

Relevant External Links for C17orf113 Gene

GeneLoc Exon Structure for
C17orf113
ECgene alternative splicing isoforms for
C17orf113

Expression for C17orf113 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C17orf113 Gene

Orthologs for C17orf113 Gene

Evolution for C17orf113 Gene

ENSEMBL:
Gene Tree for C17orf113 (if available)
TreeFam:
Gene Tree for C17orf113 (if available)

No data available for Orthologs for C17orf113 Gene

Paralogs for C17orf113 Gene

No data available for Paralogs for C17orf113 Gene

Variants for C17orf113 Gene

Additional Variant Information for C17orf113 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C17orf113

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for C17orf113 Gene

Disorders for C17orf113 Gene

No disorders were found for C17orf113 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for C17orf113 Gene

Publications for C17orf113 Gene

  1. DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. (PMID: 16625196) Zody MC … Nusbaum C (Nature 2006) 4 58

Products for C17orf113 Gene

Sources for C17orf113 Gene

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