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Aliases for C16orf97 Gene

Aliases for C16orf97 Gene

  • Chromosome 16 Open Reading Frame 97 2 3 5
  • Uncharacterized Protein C16orf97 3

External Ids for C16orf97 Gene

Summaries for C16orf97 Gene

GeneCards Summary for C16orf97 Gene

C16orf97 (Chromosome 16 Open Reading Frame 97) is a Protein Coding gene.

Additional gene information for C16orf97 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C16orf97 Gene

Genomics for C16orf97 Gene

GeneHancer (GH) Regulatory Elements for C16orf97 Gene

Promoters and enhancers for C16orf97 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J052077 Enhancer 0.4 UCNEbase 650.7 +1.3 1267 0.3 C16orf97 ENSG00000261470 GC16P052023
GH16J052078 Enhancer 0.2 ENCODE 650.7 -0.3 -267 0.2 C16orf97 ENSG00000261470 ENSG00000279779
GH16J053051 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 14.6 -974.3 -974287 2 HDGF PKNOX1 ARNT SIN3A YBX1 DMAP1 YY1 ZNF143 ZNF548 FOS LOC105371267 ENSG00000277639 RBL2 CHD9 LOC100421174 RPGRIP1L ENSG00000261261 ENSG00000260393 ENSG00000260478 C16orf97
GH16J053040 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 14.6 -964.9 -964931 5.2 FOXA2 ARID4B MZF1 SIN3A YBX1 NFXL1 RARA ZNF366 MCM3 ZNF114 RBL2 CHD9 LOC100421174 ENSG00000261261 ENSG00000260393 ENSG00000260478 C16orf97 ENSG00000261470 FTO LINC00919
GH16J051670 Enhancer 0.2 FANTOM5 4.7 +407.7 407650 0 RN7SKP142 C16orf97 PIR35026
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around C16orf97 on UCSC Golden Path with GeneCards custom track

Genomic Locations for C16orf97 Gene

Genomic Locations for C16orf97 Gene
73,031 bases
Minus strand
72,988 bases
Minus strand

Genomic View for C16orf97 Gene

Genes around C16orf97 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C16orf97 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C16orf97 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C16orf97 Gene

Proteins for C16orf97 Gene

  • Protein details for C16orf97 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Uncharacterized protein C16orf97
    Protein Accession:

    Protein attributes for C16orf97 Gene

    126 amino acids
    Molecular mass:
    14216 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C16orf97 Gene

Post-translational modifications for C16orf97 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C16orf97 Gene

No data available for DME Specific Peptides for C16orf97 Gene

Domains & Families for C16orf97 Gene

Protein Domains for C16orf97 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C16orf97: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C16orf97 Gene

Function for C16orf97 Gene

Phenotypes From GWAS Catalog for C16orf97 Gene

Phenotypes for C16orf97 Gene

genes like me logo Genes that share phenotypes with C16orf97: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for C16orf97

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C16orf97 Gene

Localization for C16orf97 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for C16orf97 Gene

Pathways & Interactions for C16orf97 Gene

SuperPathways for C16orf97 Gene

No Data Available

Interacting Proteins for C16orf97 Gene

Gene Ontology (GO) - Biological Process for C16orf97 Gene


No data available for Pathways by source and SIGNOR curated interactions for C16orf97 Gene

Drugs & Compounds for C16orf97 Gene

No Compound Related Data Available

Transcripts for C16orf97 Gene

mRNA/cDNA for C16orf97 Gene

(3) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(9) Selected AceView cDNA sequences:
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(4) RNA Central transcripts :

Unigene Clusters for C16orf97 Gene

Chromosome 16 open reading frame 97:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for C16orf97

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for C16orf97 Gene

No ASD Table

Relevant External Links for C16orf97 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for C16orf97 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for C16orf97 Gene

mRNA differential expression in normal tissues according to GTEx for C16orf97 Gene

This gene is overexpressed in Testis (x53.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for C16orf97 Gene

NURSA nuclear receptor signaling pathways regulating expression of C16orf97 Gene:


SOURCE GeneReport for Unigene cluster for C16orf97 Gene:

genes like me logo Genes that share expression patterns with C16orf97: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C16orf97 Gene

Orthologs for C16orf97 Gene

Evolution for C16orf97 Gene

Gene Tree for C16orf97 (if available)
Gene Tree for C16orf97 (if available)

No data available for Orthologs for C16orf97 Gene

Paralogs for C16orf97 Gene

No data available for Paralogs for C16orf97 Gene

Variants for C16orf97 Gene

Sequence variations from dbSNP and Humsavar for C16orf97 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000057686 -- 52,077,088(-) TTTTTTTTTTT/TTTTTTTTTT/TTTTTTTTTTTT genic_upstream_transcript_variant, intron_variant
rs1000110672 -- 52,031,745(-) A/G intron_variant
rs1000182592 -- 52,062,175(-) C/A intron_variant
rs1000268833 -- 52,055,622(-) G/A intron_variant
rs1000306748 -- 52,055,398(-) C/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for C16orf97 Gene

Variant ID Type Subtype PubMed ID
esv34024 CNV loss 18971310
nsv1058257 CNV gain 25217958
nsv827650 CNV loss 20364138

Variation tolerance for C16orf97 Gene

Gene Damage Index Score: 1.69; 32.17% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for C16orf97 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C16orf97 Gene

Disorders for C16orf97 Gene

Additional Disease Information for C16orf97

No disorders were found for C16orf97 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C16orf97 Gene

Publications for C16orf97 Gene

  1. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J … Pennacchio LA (Nature 2004) 4 58
  2. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 58

Products for C16orf97 Gene

Sources for C16orf97 Gene

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