Aliases for C16orf95-DT Gene

Data sources for C16orf95-DT Gene:

Subcategory (RNA class) for C16orf95-DT Gene

lncRNA

Aliases for C16orf95-DT Gene

External Ids for C16orf95-DT Gene

Summaries for C16orf95-DT Gene

GeneCards Summary for C16orf95-DT Gene

C16orf95-DT (C16orf95 Divergent Transcript) is an RNA Gene, and is affiliated with the lncRNA class.

Rfam classification for C16orf95-DT Gene

  • Metazoan signal recognition particle RNA

Additional gene information for C16orf95-DT Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for C16orf95-DT Gene

Genomics for C16orf95-DT Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for C16orf95-DT Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around C16orf95-DT on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for C16orf95-DT Gene

Latest Assembly
chr16:87,317,421-87,325,351
(GRCh38/hg38)
Size:
7,931 bases
Orientation:
Plus strand

Previous Assembly
chr16:87,351,115-87,351,649
(GRCh37/hg19 by Entrez Gene)
Size:
535 bases
Orientation:
Plus strand

chr16:87,351,115-87,351,643
(GRCh37/hg19 by Ensembl)
Size:
529 bases
Orientation:
Plus strand

Genomic View for C16orf95-DT Gene

Genes around C16orf95-DT on UCSC Golden Path with GeneCards custom track
C16orf95-DT in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
C16orf95-DT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C16orf95-DT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C16orf95-DT Gene

Proteins for C16orf95-DT Gene

Post-translational modifications for C16orf95-DT Gene

No Post-translational modifications

No data available for DME Specific Peptides for C16orf95-DT Gene

Domains & Families for C16orf95-DT Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for C16orf95-DT Gene

Function for C16orf95-DT Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C16orf95-DT Gene

Localization for C16orf95-DT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for C16orf95-DT Gene

Pathways & Interactions for C16orf95-DT Gene

PathCards logo

SuperPathways for C16orf95-DT Gene

No Data Available

Gene Ontology (GO) - Biological Process for C16orf95-DT Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for C16orf95-DT Gene

Drugs & Compounds for C16orf95-DT Gene

No Compound Related Data Available

Transcripts for C16orf95-DT Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for C16orf95-DT Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000784209_9606 lncRNA 403 3

RefSeq: NR_135180,

Ensembl: ENST00000602282 (view in UCSC) ,

LNCipedia: lnc-MAP1LC3B-1:5,

URS00008BE96E_9606 lncRNA 1381 2

LNCipedia: lnc-MAP1LC3B-1:3,

NONCODE: NONHSAT144273.2,

URS00008B84A9_9606 lncRNA 396 2

LNCipedia: lnc-MAP1LC3B-1:1,

NONCODE: NONHSAT144275.2,

URS00008B3A38_9606 lncRNA 349 2

LNCipedia: lnc-MAP1LC3B-1:2,

NONCODE: NONHSAT144274.2,

URS0000D56DBB_9606 lncRNA 7724 1

LNCipedia: lnc-MAP1LC3B-1:10,

C16orf95-DT in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for C16orf95-DT Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for C16orf95-DT Gene

No ASD Table

Relevant External Links for C16orf95-DT Gene

GeneLoc Exon Structure for
C16orf95-DT

Expression for C16orf95-DT Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C16orf95-DT Gene

Orthologs for C16orf95-DT Gene

Evolution for C16orf95-DT Gene

ENSEMBL:
Gene Tree for C16orf95-DT (if available)
TreeFam:
Gene Tree for C16orf95-DT (if available)

No data available for Orthologs for C16orf95-DT Gene

Paralogs for C16orf95-DT Gene

No data available for Paralogs for C16orf95-DT Gene

Variants for C16orf95-DT Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for C16orf95-DT Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for C16orf95-DT Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C16orf95-DT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for C16orf95-DT Gene

Disorders for C16orf95-DT Gene

No disorders were found for C16orf95-DT Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for C16orf95-DT Gene

Publications for C16orf95-DT Gene

  1. Expressed sequence tag analysis of human retina for the NEIBank Project: retbindin, an abundant, novel retinal cDNA and alternative splicing of other retina-preferred gene transcripts. (PMID: 12107411) Wistow G … Peterson K (Molecular vision 2002) 3

No data available for Mastermind for C16orf95-DT Gene

Products for C16orf95-DT Gene

Sources for C16orf95-DT Gene