Aliases for C11orf94 Gene
Aliases for C11orf94 Gene
External Ids for C11orf94 Gene
- HGNC: 37213
- Entrez Gene: 143678
- Ensembl: ENSG00000234776
- UniProtKB: C9JXX5
Previous GeneCards Identifiers for C11orf94 Gene
- GC11M045885
- GC11M045928
- GC11M045635
- GC11M047069
- GC11M047916
- GC11M050773
- GC11M051568
- GC11M052230
- GC11M052890
- GC11M053558
- GC11M054224
Summaries for C11orf94 Gene
GeneCards Summary for C11orf94 Gene
C11orf94 (Chromosome 11 Open Reading Frame 94) is a Protein Coding gene.
Additional gene information for C11orf94 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C11orf94 Gene
Genomics for C11orf94 Gene
GeneHancer (GH) Regulatory Elements for C11orf94 Gene
Promoters and enhancers for C11orf94 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH11J045905 | Enhancer | 0.7 | ENCODE dbSUPER | 650.7 | +0.1 | 136 | 2.9 | GATA3 NFIC POLR2A CREB1 SUPT5H | ENSG00000255498 C11orf94 SLC35C1 MAPK8IP1 | |
| GH11J045879 | Enhancer | 1.1 | ENCODE dbSUPER | 13 | +26.1 | 26148 | 3.1 | ATF1 PKNOX1 TCF12 FOS ATF7 NCOA1 REST TSHZ1 ATF4 GMEB1 | C11orf94 ENSG00000255498 LARGE2 PEX16 MAPK8IP1 DKFZp779M0652 CRY2 | |
| GH11J045854 | Enhancer | 1.1 | Ensembl ENCODE dbSUPER | 11.6 | +49.2 | 49180 | 6.2 | MXI1 CLOCK USF1 KLF17 MAX SIN3A ZIC2 RAD21 YY1 ZFHX2 | MAPK8IP1 ENSG00000255498 C11orf94 LARGE2 PEX16 DKFZp779M0652 SLC35C1 CRY2 | |
| GH11J045941 | Enhancer | 0.4 | dbSUPER | 12.9 | -34.9 | -34913 | 2.3 | ATF4 ATF7 ATF2 | PEX16 LARGE2 C11orf94 ENSG00000255498 PHF21A ENSG00000254653 | |
| GH11J045944 | Enhancer | 0.4 | ENCODE | 12.5 | -38.4 | -38367 | 2.2 | NFIC IKZF1 CBFA2T3 | LARGE2 PEX16 C11orf94 ENSG00000255498 SLC35C1 PHF21A ENSG00000254653 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)
GeneHancers around C11orf94 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for C11orf94 Gene
Genomic Locations for C11orf94 Gene
- chr11:45,906,513-45,907,282
- (GRCh38/hg38)
- Size:
- 770 bases
- Orientation:
- Minus strand
- chr11:45,928,085-45,928,833
- (GRCh37/hg19)
- Size:
- 749 bases
- Orientation:
- Minus strand
Genomic View for C11orf94 Gene
Genes around C11orf94 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 11p11.2 by Entrez Gene
- 11p11.2 by HGNC
- 11p11.2 by Ensembl
C11orf94 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for C11orf94 Gene
Proteins for C11orf94 Gene
-
Protein details for C11orf94 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- C9JXX5-CK094_HUMAN
- Recommended name:
- Uncharacterized protein C11orf94
- Protein Accession:
- C9JXX5
Protein attributes for C11orf94 Gene
- Size:
- 98 amino acids
- Molecular mass:
- 10902 Da
- Quaternary structure:
- No Data Available
Protein Expression for C11orf94 Gene
Post-translational modifications for C11orf94 Gene
Other Protein References for C11orf94 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
-
Custom Antibody ServicesOriGene Antibodies for C11orf94
- Invitrogen Antibodies for C11orf94 (AFLGC-C11orf94)
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-
Biorbyt antibodies for C11orf94
-
Boster Bio Antibodies for C11orf94
Protein Products
-
OriGene Purified Proteins for C11orf94
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- Search GeneTex for Proteins for C11orf94
Assay Products
No data available for DME Specific Peptides for C11orf94 Gene
Domains & Families for C11orf94 Gene
Gene Families for C11orf94 Gene
- Human Protein Atlas (HPA):
-
- Predicted secreted proteins
Graphical View of Domain Structure for InterPro Entry
No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C11orf94 Gene
Function for C11orf94 Gene
Phenotypes for C11orf94 Gene
Animal Model Products
-
Taconic Biosciences Mouse Models for C11orf94
- Cyagen custom Knockout/knockin (KOKI) mouse models for C11orf94
-
CRISPR Products
-
OriGene CRISPR knockouts for C11orf94
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- genomics-online: gRNA clones - Search results for 18 available C11ORF94 gene related products
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- Applied Biological Materials CRISPR for C11orf94
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for C11orf94
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miRNA Products
Inhibitory RNA Products
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Clone Products
- Sino Biological Human cDNA Clone for C11orf94
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-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Cell Line Products
-
Horizon Cell Lines for C11orf94
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C11orf94 Gene
Localization for C11orf94 Gene
Subcellular locations from UniProtKB/Swiss-Prot for C11orf94 Gene
- Secreted.
| Compartment | Confidence |
|---|---|
| extracellular | 4 |
| plasma membrane | 2 |
| mitochondrion | 1 |
| endoplasmic reticulum | 1 |
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005576 | extracellular region | IEA | -- |
No data available for Subcellular locations from the Human Protein Atlas (HPA) for C11orf94 Gene
Transcripts for C11orf94 Gene
mRNA/cDNA for C11orf94 Gene
- (1) REFSEQ mRNAs :
- (2) Additional mRNA sequences :
- (4) Selected AceView cDNA sequences:
- (2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
-
- ENST00000632252 760 bps (uc284myp.1)
- ENST00000449465 369 bps (uc001nbs.5)
Unigene Clusters for C11orf94 Gene
CRISPR Products
-
OriGene CRISPR knockouts for C11orf94
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for C11orf94
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- Overview of 18 available C11ORF94 gene related products
- Applied Biological Materials CRISPR for C11orf94
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for C11orf94
- GenScript: Design CRISPR guide RNA sequences for C11orf94
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for C11orf94
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- genomics-online: shRNA clones - Search results for 18 available C11ORF94 gene related products
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Clone Products
- Sino Biological Human cDNA Clone for C11orf94
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- Applied Biological Materials Clones for C11orf94
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Expression for C11orf94 Gene
mRNA differential expression in normal tissues according to GTEx for C11orf94 Gene
This gene is overexpressed in Testis (x43.3).
This gene is overexpressed in Cervix (69.0).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for C11orf94 Gene
- Elite partner
NURSA nuclear receptor signaling pathways regulating expression of C11orf94 Gene:
C11orf94SOURCE GeneReport for Unigene cluster for C11orf94 Gene:
Hs.193741Primer Products
-
OriGene qPCR primer pairs for C11orf94
- genomics-online: primer clones - Search results for 18 available C11ORF94 gene related products
- Overview of 18 available C11ORF94 gene related products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C11orf94 Gene
Orthologs for C11orf94 Gene
This gene was present in the common ancestor of mammals.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | C11H11orf94 33 |
|
||
| C11orf94 34 |
|
OneToOne | |||
| dog (Canis familiaris) |
Mammalia | C11orf94 34 |
|
OneToOne | |
| C18H11orf94 33 |
|
||||
| mouse (Mus musculus) |
Mammalia | 1700029I15Rik 16 34 33 |
|
||
| rat (Rattus norvegicus) |
Mammalia | RGD1563263 33 |
|
||
| cow (Bos Taurus) |
Mammalia | C15H11orf94 34 33 |
|
OneToOne | |
| oppossum (Monodelphis domestica) |
Mammalia | C11orf94 34 |
|
OneToOne |
- Species where no ortholog for C11orf94 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- lizard (Anolis carolinensis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- platypus (Ornithorhynchus anatinus)
- rainbow trout (Oncorhynchus mykiss)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
- zebrafish (Danio rerio)
Paralogs for C11orf94 Gene
No data available for Paralogs for C11orf94 Gene
Variants for C11orf94 Gene
| SNP ID | Clin | Chr 11 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000372980 | -- | 45,907,982(-) | G/T | upstream_transcript_variant | |
| rs1000697853 | -- | 45,909,007(-) | A/G | upstream_transcript_variant | |
| rs1001700743 | -- | 45,909,069(-) | G/A | upstream_transcript_variant | |
| rs1001960913 | -- | 45,908,277(-) | T/C | upstream_transcript_variant | |
| rs1002021223 | -- | 45,908,017(-) | G/A | upstream_transcript_variant |
Residual Variation Intolerance Score:
82.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
1.00;
20.62% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for C11orf94 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- C11orf94
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C11orf94 Gene
Disorders for C11orf94 Gene
Additional Disease Information for C11orf94
No disorders were found for C11orf94 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C11orf94 Gene
Publications for C11orf94 Gene
- Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor TD … Sakaki Y (Nature 2006) 4 58
- The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 58
Products for C11orf94 Gene
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- Custom Antibody ServicesOriGene Antibodies for C11orf94
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- Taconic Biosciences Mouse Models for C11orf94
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- Humanized Mice
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Sources for C11orf94 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
- (159) GlyConnect
- (160) Aminode
- (161) GeneCopoeia
- (162) GPS-Prot
- (163) RNACentral
- (164) LncRNADisease
- (165) LOVD
- (166) miR2Disease
- (167) DiseaseEnhancer
- (168) Boster Bio
- (169) Biorbyt