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Aliases for BTG3-AS1 Gene

Subcategory (RNA class) for BTG3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for BTG3-AS1 Gene

  • BTG3 Antisense RNA 1 2 3 5
  • Antisense NcRNA In The ANA/BTG3 Locus 2 3
  • ASBEL 3

External Ids for BTG3-AS1 Gene

Summaries for BTG3-AS1 Gene

GeneCards Summary for BTG3-AS1 Gene

BTG3-AS1 (BTG3 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with BTG3-AS1 include Colorectal Cancer.

Additional gene information for BTG3-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BTG3-AS1 Gene

Genomics for BTG3-AS1 Gene

GeneHancer (GH) Regulatory Elements for BTG3-AS1 Gene

Promoters and enhancers for BTG3-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J017610 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 650.7 +0.4 407 3.4 ATF1 BRCA1 YY1 POLR2B GLIS2 ZNF213 ZNF207 ZNF143 FOS ATF7 BTG3 BTG3-AS1 GC21P017613 CXADR
GH21J017607 Enhancer 0.4 ENCODE 0.7 -3.7 -3668 1.9 ZBTB12 TRIM28 BTG3 BTG3-AS1 ENSG00000199962 CXADR
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around BTG3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for BTG3-AS1 Gene

Genomic Locations for BTG3-AS1 Gene
chr21:17,611,744-17,633,199
(GRCh38/hg38)
Size:
21,456 bases
Orientation:
Plus strand

Genomic View for BTG3-AS1 Gene

Genes around BTG3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BTG3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BTG3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BTG3-AS1 Gene

Function for BTG3-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BTG3-AS1 Gene

Localization for BTG3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BTG3-AS1 Gene

Pathways & Interactions for BTG3-AS1 Gene

SuperPathways for BTG3-AS1 Gene

No Data Available

Interacting Proteins for BTG3-AS1 Gene

Gene Ontology (GO) - Biological Process for BTG3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BTG3-AS1 Gene

Drugs & Compounds for BTG3-AS1 Gene

No Compound Related Data Available

Transcripts for BTG3-AS1 Gene

mRNA/cDNA for BTG3-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for BTG3-AS1 Gene

No ASD Table

Relevant External Links for BTG3-AS1 Gene

GeneLoc Exon Structure for
BTG3-AS1
ECgene alternative splicing isoforms for
BTG3-AS1

Expression for BTG3-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BTG3-AS1 Gene

Orthologs for BTG3-AS1 Gene

Evolution for BTG3-AS1 Gene

ENSEMBL:
Gene Tree for BTG3-AS1 (if available)
TreeFam:
Gene Tree for BTG3-AS1 (if available)

No data available for Orthologs for BTG3-AS1 Gene

Paralogs for BTG3-AS1 Gene

No data available for Paralogs for BTG3-AS1 Gene

Variants for BTG3-AS1 Gene

Additional Variant Information for BTG3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BTG3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BTG3-AS1 Gene

Disorders for BTG3-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for BTG3-AS1 Gene - From: LncRNADisease

Disorder Aliases PubMed IDs
colorectal cancer
  • crc
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for BTG3-AS1

genes like me logo Genes that share disorders with BTG3-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for BTG3-AS1 Gene

Publications for BTG3-AS1 Gene

  1. ASBEL-TCF3 complex is required for the tumorigenicity of colorectal cancer cells. (PMID: 27791078) Taniue K … Akiyama T (Proceedings of the National Academy of Sciences of the United States of America 2016) 2 3 58
  2. ASBEL, an ANA/BTG3 antisense transcript required for tumorigenicity of ovarian carcinoma. (PMID: 23419616) Yanagida S … Akiyama T (Scientific reports 2013) 2 3 58
  3. Targeting long non-coding RNA ASBEL with oligonucleotide antagonist for breast cancer therapy. (PMID: 28552529) Xia Y … Sheng W (Biochemical and biophysical research communications 2017) 3 58
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  5. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 58

Products for BTG3-AS1 Gene

Sources for BTG3-AS1 Gene

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