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Aliases for BTF3P6 Gene

Subcategory (RNA class) for BTF3P6 Gene

lncRNA

Aliases for BTF3P6 Gene

  • Basic Transcription Factor 3 Pseudogene 6 2 3 5

External Ids for BTF3P6 Gene

ORGUL Members for BTF3P6 Gene

Previous GeneCards Identifiers for BTF3P6 Gene

  • GC21U900372
  • GC21M020369
  • GC21M034891

Summaries for BTF3P6 Gene

GeneCards Summary for BTF3P6 Gene

BTF3P6 (Basic Transcription Factor 3 Pseudogene 6) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for BTF3P6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BTF3P6 Gene

Genomics for BTF3P6 Gene

GeneHancer (GH) Regulatory Elements for BTF3P6 Gene

Promoters and enhancers for BTF3P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J033945 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 5 -429.9 -429948 7.3 HDGF PKNOX1 FOXA2 SMAD1 ARNT ARID4B SIN3A FEZF1 DMAP1 IRF4 SON LINC00649 ATP5PO GART TMEM50B BTF3P6 ENSG00000249209 ENSG00000273102 GC21P033513
GH21J033156 Enhancer 0.6 dbSUPER 4.2 +361.6 361620 1.9 SP3 PHF21A SIN3A MIER2 ZNF398 REST ZNF366 EHMT2 KLF8 EGR2 ENSG00000226433 LINC01548 LINC00846 BTF3P6
GH21J033155 Enhancer 0.5 dbSUPER 4.9 +363.5 363485 1.2 MXI1 POLR2A ZNF366 ZNF512 ENSG00000226433 BTF3P6 LOC101928107
GH21J033151 Enhancer 0.4 Ensembl dbSUPER 4.2 +367.0 367007 0.6 BTF3P6 ENSG00000226433 LOC101928107
GH21J033524 Promoter 0.7 EPDnew 0.4 -5.8 -5828 0.1 MEIS2 POLR2A GART BTF3P6 GC21P033513 SON
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around BTF3P6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for BTF3P6 Gene

Genomic Locations for BTF3P6 Gene
chr21:33,518,610-33,519,108
(GRCh38/hg38)
Size:
499 bases
Orientation:
Minus strand
chr21:34,890,917-34,891,415
(GRCh37/hg19)

Genomic View for BTF3P6 Gene

Genes around BTF3P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BTF3P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BTF3P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BTF3P6 Gene

Function for BTF3P6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BTF3P6 Gene

Localization for BTF3P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BTF3P6 Gene

Pathways & Interactions for BTF3P6 Gene

SuperPathways for BTF3P6 Gene

No Data Available

Interacting Proteins for BTF3P6 Gene

Gene Ontology (GO) - Biological Process for BTF3P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BTF3P6 Gene

Drugs & Compounds for BTF3P6 Gene

No Compound Related Data Available

Transcripts for BTF3P6 Gene

mRNA/cDNA for BTF3P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for BTF3P6 Gene

No ASD Table

Relevant External Links for BTF3P6 Gene

GeneLoc Exon Structure for
BTF3P6
ECgene alternative splicing isoforms for
BTF3P6

Expression for BTF3P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BTF3P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of BTF3P6 Gene:

BTF3P6
genes like me logo Genes that share expression patterns with BTF3P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BTF3P6 Gene

Orthologs for BTF3P6 Gene

Evolution for BTF3P6 Gene

ENSEMBL:
Gene Tree for BTF3P6 (if available)
TreeFam:
Gene Tree for BTF3P6 (if available)

No data available for Orthologs for BTF3P6 Gene

Paralogs for BTF3P6 Gene

No data available for Paralogs for BTF3P6 Gene

Variants for BTF3P6 Gene

Additional Variant Information for BTF3P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BTF3P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BTF3P6 Gene

Disorders for BTF3P6 Gene

No disorders were found for BTF3P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for BTF3P6 Gene

Publications for BTF3P6 Gene

No publications were found for BTF3P6 Gene.

Products for BTF3P6 Gene

Sources for BTF3P6 Gene

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