Aliases for BTF3P6 Gene

Aliases for BTF3P6 Gene

  • Basic Transcription Factor 3 Pseudogene 6 2 3 5
  • BTF3P6 5

External Ids for BTF3P6 Gene

Previous GeneCards Identifiers for BTF3P6 Gene

  • GC21U900372
  • GC21M020369
  • GC21M034891

Summaries for BTF3P6 Gene

GeneCards Summary for BTF3P6 Gene

BTF3P6 (Basic Transcription Factor 3 Pseudogene 6) is a Pseudogene.

Additional gene information for BTF3P6 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for BTF3P6 Gene

Genomics for BTF3P6 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for BTF3P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J033945 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 5 -429.9 -429948 7.3 BCLAF1 SP1 NCOR1 MYC IKZF1 ZNF600 JUND ZNF592 ATF2 POLR2A LINC00649 HSALNG0132813-004 ATP5PO BTF3P6 GART SON HSALNG0132813-003 lnc-ITSN1-3 ENSG00000249209 HSALNG0132813-001
GH21J033156 Enhancer 0.6 dbSUPER 4.1 +361.6 361620 1.9 REST SIN3A EHMT2 MIER2 ZNF398 ZNF366 PHF21A SP3 EGR2 KLF8 LINC01548 BTF3P6 ENSG00000226433 RF00017-3327 NONHSAG032698.2 ENSG00000249624 IFNAR2 OLIG1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around BTF3P6 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for BTF3P6 Gene

Latest Assembly
chr21:33,518,610-33,519,108
(GRCh38/hg38)
Size:
499 bases
Orientation:
Minus strand

Previous Assembly
chr21:34,890,917-34,891,415
(GRCh37/hg19 by Entrez Gene)
Size:
499 bases
Orientation:
Minus strand

chr21:34,890,917-34,891,415
(GRCh37/hg19 by Ensembl)
Size:
499 bases
Orientation:
Minus strand

Genomic View for BTF3P6 Gene

Genes around BTF3P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BTF3P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BTF3P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BTF3P6 Gene

Proteins for BTF3P6 Gene

Post-translational modifications for BTF3P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BTF3P6 Gene

Domains & Families for BTF3P6 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for BTF3P6 Gene

Function for BTF3P6 Gene

Phenotypes From GWAS Catalog for BTF3P6 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BTF3P6 Gene

Localization for BTF3P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BTF3P6 Gene

Pathways & Interactions for BTF3P6 Gene

PathCards logo

SuperPathways for BTF3P6 Gene

No Data Available

Gene Ontology (GO) - Biological Process for BTF3P6 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for BTF3P6 Gene

Drugs & Compounds for BTF3P6 Gene

No Compound Related Data Available

Transcripts for BTF3P6 Gene

mRNA/cDNA for BTF3P6 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BTF3P6 Gene

No ASD Table

Relevant External Links for BTF3P6 Gene

GeneLoc Exon Structure for
BTF3P6

Expression for BTF3P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for BTF3P6 Gene

genes like me logo Genes that share expression patterns with BTF3P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BTF3P6 Gene

Orthologs for BTF3P6 Gene

Evolution for BTF3P6 Gene

ENSEMBL:
Gene Tree for BTF3P6 (if available)
TreeFam:
Gene Tree for BTF3P6 (if available)
Alliance of Genome Resources:
Additional Orthologs for BTF3P6

No data available for Orthologs for BTF3P6 Gene

Paralogs for BTF3P6 Gene

No data available for Paralogs for BTF3P6 Gene

Variants for BTF3P6 Gene

Additional Variant Information for BTF3P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BTF3P6
Leiden Open Variation Database (LOVD)
BTF3P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BTF3P6 Gene

Disorders for BTF3P6 Gene

No disorders were found for BTF3P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for BTF3P6 Gene

Publications for BTF3P6 Gene

No publications were found for BTF3P6 Gene.

No data available for Mastermind for BTF3P6 Gene

Products for BTF3P6 Gene

Sources for BTF3P6 Gene