Aliases for BTF3L4P4 Gene

Aliases for BTF3L4P4 Gene

  • Basic Transcription Factor 3 Like 4 Pseudogene 4 2 3 5
  • BTF3L4P4 5

External Ids for BTF3L4P4 Gene

Previous GeneCards Identifiers for BTF3L4P4 Gene

  • GC04M169521

Summaries for BTF3L4P4 Gene

GeneCards Summary for BTF3L4P4 Gene

BTF3L4P4 (Basic Transcription Factor 3 Like 4 Pseudogene 4) is a Pseudogene.

Additional gene information for BTF3L4P4 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for BTF3L4P4 Gene

Genomics for BTF3L4P4 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for BTF3L4P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J168598 Enhancer 0.4 Ensembl dbSUPER 600.7 +0.1 128 1 ZBTB17 BTF3L4P4 lnc-DDX60L-2 PALLD-AS1 PALLD RNU6-1336P lnc-ANXA10-1 DDX60L CBR4
GH04J168599 Enhancer 0.2 Ensembl 600.7 -0.7 -672 0.2 BTF3L4P4 lnc-DDX60L-2 PALLD-AS1 PALLD RNU6-1336P DDX60L CBR4
GH04J168600 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -2.7 -2672 3.4 CEBPB SMARCC1 FOS JUN JUND EP300 SMARCA4 NR3C1 PALLD PALLD-AS1 RNU6-1336P BTF3L4P4 DDX60L CBR4
GH04J168629 Promoter/Enhancer 2.3 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 -37.9 -37903 14.9 CTCF TEAD4 PRDM10 ZNF629 ZNF692 ZIC2 PKNOX1 POLR2A PATZ1 ZNF501 PALLD RNU6-1336P PALLD-AS1 BTF3L4P4 DDX60L CBR4
GH04J168603 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -6.0 -5972 2.8 PRDM1 ZNF600 SMARCC1 JUND CEBPB ESR1 EZH2 FOS OSR2 JUN PALLD PALLD-AS1 RNU6-1336P BTF3L4P4 DDX60L CBR4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around BTF3L4P4 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for BTF3L4P4 Gene

Genomic Locations for BTF3L4P4 Gene
chr4:168,598,110-168,598,829
(GRCh38/hg38)
Size:
720 bases
Orientation:
Minus strand
chr4:169,519,266-169,519,977
(GRCh37/hg19)
Size:
712 bases
Orientation:
Minus strand

Genomic View for BTF3L4P4 Gene

Genes around BTF3L4P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BTF3L4P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BTF3L4P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BTF3L4P4 Gene

Proteins for BTF3L4P4 Gene

Post-translational modifications for BTF3L4P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BTF3L4P4 Gene

Domains & Families for BTF3L4P4 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for BTF3L4P4 Gene

Function for BTF3L4P4 Gene

Phenotypes From GWAS Catalog for BTF3L4P4 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BTF3L4P4 Gene

Localization for BTF3L4P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BTF3L4P4 Gene

Pathways & Interactions for BTF3L4P4 Gene

PathCards logo

SuperPathways for BTF3L4P4 Gene

No Data Available

Gene Ontology (GO) - Biological Process for BTF3L4P4 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for BTF3L4P4 Gene

Drugs & Compounds for BTF3L4P4 Gene

No Compound Related Data Available

Transcripts for BTF3L4P4 Gene

mRNA/cDNA for BTF3L4P4 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for BTF3L4P4 Gene

No ASD Table

Relevant External Links for BTF3L4P4 Gene

GeneLoc Exon Structure for
BTF3L4P4

Expression for BTF3L4P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for BTF3L4P4 Gene

genes like me logo Genes that share expression patterns with BTF3L4P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BTF3L4P4 Gene

Orthologs for BTF3L4P4 Gene

Evolution for BTF3L4P4 Gene

ENSEMBL:
Gene Tree for BTF3L4P4 (if available)
TreeFam:
Gene Tree for BTF3L4P4 (if available)

No data available for Orthologs for BTF3L4P4 Gene

Paralogs for BTF3L4P4 Gene

No data available for Paralogs for BTF3L4P4 Gene

Variants for BTF3L4P4 Gene

Additional Variant Information for BTF3L4P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BTF3L4P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BTF3L4P4 Gene

Disorders for BTF3L4P4 Gene

No disorders were found for BTF3L4P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for BTF3L4P4 Gene

Publications for BTF3L4P4 Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3

No data available for Mastermind for BTF3L4P4 Gene

Products for BTF3L4P4 Gene

Sources for BTF3L4P4 Gene