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Aliases for BTBD7P1 Gene

Subcategory (RNA class) for BTBD7P1 Gene

lncRNA

Aliases for BTBD7P1 Gene

  • BTB Domain Containing 7 Pseudogene 1 2 3 5
  • BTB (POZ) Domain Containing 7 Pseudogene 1 2

External Ids for BTBD7P1 Gene

ORGUL Members for BTBD7P1 Gene

Previous GeneCards Identifiers for BTBD7P1 Gene

  • GC10M013206

Summaries for BTBD7P1 Gene

GeneCards Summary for BTBD7P1 Gene

BTBD7P1 (BTB Domain Containing 7 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for BTBD7P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BTBD7P1 Gene

Genomics for BTBD7P1 Gene

GeneHancer (GH) Regulatory Elements for BTBD7P1 Gene

Promoters and enhancers for BTBD7P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I013158 Enhancer 0.8 Ensembl ENCODE 550.8 -0.5 -463 0.8 ZNF687 CHD1 SIN3A ELF1 ZBTB40 YY1 ELK1 POLR2A RCOR1 ZBTB33 BTBD7P1 GC10M013159 RPL36AP36
GH10I013345 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 22.9 -191.0 -191030 7.3 PKNOX1 ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF213 SEPHS1 PHYH BTBD7P1 PRPF18 PIR45625 GC10P013355
GH10I013160 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 14 -3.5 -3500 2.1 PKNOX1 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 E2F8 MCM10 RPL36AP36 GC10M013159 BTBD7P1 ENSG00000228302 OPTN CCDC3 PRPF18 GC10P013202
GH10I013586 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.4 -429.1 -429112 1.9 PKNOX1 CLOCK ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B IRF4 YY1 PRPF18 BTBD7P1 GC10M013591 GC10M013518
GH10I012447 Enhancer 1.5 FANTOM5 Ensembl ENCODE 12.1 +709.2 709243 2 ATF1 FEZF1 ZNF2 ZNF213 ELK1 FOS ATF7 RUNX3 SP3 JUNB UPF2 CAMK1D ENSG00000228302 ENSG00000252438 BTBD7P1 SEC61A2 RNU6ATAC39P GC10M012437
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around BTBD7P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for BTBD7P1 Gene

Genomic Locations for BTBD7P1 Gene
chr10:13,156,681-13,158,136
(GRCh38/hg38)
Size:
1,456 bases
Orientation:
Minus strand
chr10:13,198,681-13,200,136
(GRCh37/hg19)

Genomic View for BTBD7P1 Gene

Genes around BTBD7P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BTBD7P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BTBD7P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BTBD7P1 Gene

Proteins for BTBD7P1 Gene

Post-translational modifications for BTBD7P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BTBD7P1 Gene

Domains & Families for BTBD7P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BTBD7P1 Gene

Function for BTBD7P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BTBD7P1 Gene

Localization for BTBD7P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BTBD7P1 Gene

Pathways & Interactions for BTBD7P1 Gene

SuperPathways for BTBD7P1 Gene

No Data Available

Interacting Proteins for BTBD7P1 Gene

Gene Ontology (GO) - Biological Process for BTBD7P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BTBD7P1 Gene

Drugs & Compounds for BTBD7P1 Gene

No Compound Related Data Available

Transcripts for BTBD7P1 Gene

mRNA/cDNA for BTBD7P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BTBD7P1 Gene

No ASD Table

Relevant External Links for BTBD7P1 Gene

GeneLoc Exon Structure for
BTBD7P1
ECgene alternative splicing isoforms for
BTBD7P1

Expression for BTBD7P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BTBD7P1 Gene

mRNA differential expression in normal tissues according to GTEx for BTBD7P1 Gene

This gene is overexpressed in Testis (x4.7) and Muscle - Skeletal (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of BTBD7P1 Gene:

BTBD7P1
genes like me logo Genes that share expression patterns with BTBD7P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BTBD7P1 Gene

Orthologs for BTBD7P1 Gene

Evolution for BTBD7P1 Gene

ENSEMBL:
Gene Tree for BTBD7P1 (if available)
TreeFam:
Gene Tree for BTBD7P1 (if available)

No data available for Orthologs for BTBD7P1 Gene

Paralogs for BTBD7P1 Gene

No data available for Paralogs for BTBD7P1 Gene

Variants for BTBD7P1 Gene

Additional Variant Information for BTBD7P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BTBD7P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BTBD7P1 Gene

Disorders for BTBD7P1 Gene

No disorders were found for BTBD7P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for BTBD7P1 Gene

Publications for BTBD7P1 Gene

No publications were found for BTBD7P1 Gene.

Products for BTBD7P1 Gene

Sources for BTBD7P1 Gene

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