Free for academic non-profit institutions. Other users need a Commercial license

Aliases for BTBD6P1 Gene

Aliases for BTBD6P1 Gene

  • BTB Domain Containing 6 Pseudogene 1 2 3 5
  • BTB (POZ) Domain Containing 6 Pseudogene 1 2 3

External Ids for BTBD6P1 Gene

Summaries for BTBD6P1 Gene

GeneCards Summary for BTBD6P1 Gene

BTBD6P1 (BTB Domain Containing 6 Pseudogene 1) is a Pseudogene.

Additional gene information for BTBD6P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BTBD6P1 Gene

Genomics for BTBD6P1 Gene

GeneHancer (GH) Regulatory Elements for BTBD6P1 Gene

Promoters and enhancers for BTBD6P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J023902 Promoter/Enhancer 0.9 FANTOM5 Ensembl dbSUPER 600.7 +0.0 41 0.9 BTBD6P1 FUCA1 E2F2 CNR2 GC01M023881
GH01J023899 Enhancer 0.8 ENCODE dbSUPER 0.7 +3.8 3772 0.2 ZNF687 CREM CBFB ZNF766 RUNX3 BCL11A BATF EBF1 BHLHE40 TAL1 FUCA1 ELOA-AS1 PITHD1 SRSF10 BTBD6P1 CNR2 GC01M023881
GH01J023904 Enhancer 0.8 dbSUPER 0.7 -2.5 -2460 2.9 ZNF687 RELA CREM MLLT1 IKZF1 ZBTB33 PRDM10 BACH1 IKZF2 TRIM22 ENSG00000232557 FUCA1 NCMAP BTBD6P1 CNR2
GH01J023895 Enhancer 0.9 ENCODE dbSUPER 0.4 +6.2 6245 2.7 SP1 CREM PRDM1 RXRA CEBPA CEBPB ZBTB44 EED MAX RUNX3 FUCA1 ELOA-AS1 PITHD1 SRSF10 BTBD6P1 GC01M023881 CNR2
GH01J023886 Enhancer 0.8 ENCODE dbSUPER 0.4 +14.4 14449 3.7 RELA CREM IKZF1 SMAD5 CBFB EED RUNX3 BCLAF1 NBN JUNB FUCA1 GC01M023881 BTBD6P1 CNR2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around BTBD6P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for BTBD6P1 Gene

Genomic Locations for BTBD6P1 Gene
chr1:23,901,049-23,903,008
(GRCh38/hg38)
Size:
1,960 bases
Orientation:
Minus strand
chr1:24,227,539-24,229,498
(GRCh37/hg19)
Size:
1,960 bases
Orientation:
Minus strand

Genomic View for BTBD6P1 Gene

Genes around BTBD6P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BTBD6P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BTBD6P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BTBD6P1 Gene

Proteins for BTBD6P1 Gene

Post-translational modifications for BTBD6P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BTBD6P1 Gene

Domains & Families for BTBD6P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BTBD6P1 Gene

Function for BTBD6P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BTBD6P1 Gene

Localization for BTBD6P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BTBD6P1 Gene

Pathways & Interactions for BTBD6P1 Gene

PathCards logo

SuperPathways for BTBD6P1 Gene

No Data Available

Interacting Proteins for BTBD6P1 Gene

Gene Ontology (GO) - Biological Process for BTBD6P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BTBD6P1 Gene

Drugs & Compounds for BTBD6P1 Gene

No Compound Related Data Available

Transcripts for BTBD6P1 Gene

mRNA/cDNA for BTBD6P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BTBD6P1 Gene

No ASD Table

Relevant External Links for BTBD6P1 Gene

GeneLoc Exon Structure for
BTBD6P1
ECgene alternative splicing isoforms for
BTBD6P1

Expression for BTBD6P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of BTBD6P1 Gene:

BTBD6P1
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BTBD6P1 Gene

Orthologs for BTBD6P1 Gene

Evolution for BTBD6P1 Gene

ENSEMBL:
Gene Tree for BTBD6P1 (if available)
TreeFam:
Gene Tree for BTBD6P1 (if available)

No data available for Orthologs for BTBD6P1 Gene

Paralogs for BTBD6P1 Gene

No data available for Paralogs for BTBD6P1 Gene

Variants for BTBD6P1 Gene

Additional Variant Information for BTBD6P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BTBD6P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BTBD6P1 Gene

Disorders for BTBD6P1 Gene

No disorders were found for BTBD6P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for BTBD6P1 Gene

Publications for BTBD6P1 Gene

No publications were found for BTBD6P1 Gene.

No data available for External Links for BTBD6P1 Gene

Products for BTBD6P1 Gene

Sources for BTBD6P1 Gene

Content
Loading form....