Aliases for BTBD19 Gene

Aliases for BTBD19 Gene

  • BTB Domain Containing 19 2 3 5
  • BTB/POZ Domain-Containing Protein 19 3 4
  • BTB (POZ) Domain Containing 19 2 3
  • Novel BTB Domain Containing Protein 3
  • BTBD19 5

External Ids for BTBD19 Gene

Previous GeneCards Identifiers for BTBD19 Gene

  • GC01P045048
  • GC01P045274
  • GC01P043388

Summaries for BTBD19 Gene

GeneCards Summary for BTBD19 Gene

BTBD19 (BTB Domain Containing 19) is a Protein Coding gene.

Additional gene information for BTBD19 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for BTBD19 Gene

Genomics for BTBD19 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for BTBD19 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around BTBD19 on the GeneHancer Hub at the UCSC Golden Path

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for BTBD19

Genomic Locations for BTBD19 Gene

Genomic Locations for BTBD19 Gene
chr1:44,807,442-44,815,585
(GRCh38/hg38)
Size:
8,144 bases
Orientation:
Plus strand
chr1:45,274,154-45,281,257
(GRCh37/hg19)
Size:
7,104 bases
Orientation:
Plus strand

Genomic View for BTBD19 Gene

Genes around BTBD19 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BTBD19 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BTBD19 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BTBD19 Gene

Proteins for BTBD19 Gene

  • Protein details for BTBD19 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    C9JJ37-BTBDJ_HUMAN
    Recommended name:
    BTB/POZ domain-containing protein 19
    Protein Accession:
    C9JJ37
    Secondary Accessions:
    • B4E384
    • B7ZC36
    • B7ZC37

    Protein attributes for BTBD19 Gene

    Size:
    291 amino acids
    Molecular mass:
    32365 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for BTBD19 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for BTBD19 Gene

Post-translational modifications for BTBD19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BTBD19 Gene

Domains & Families for BTBD19 Gene

Gene Families for BTBD19 Gene

HGNC:
Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for BTBD19 Gene

Suggested Antigen Peptide Sequences for BTBD19 Gene

GenScript: Design optimal peptide antigens:
  • BTB/POZ domain-containing protein 19 (BTBDJ_HUMAN)
genes like me logo Genes that share domains with BTBD19: view

No data available for Graphical View of Domain Structure and UniProtKB/Swiss-Prot for BTBD19 Gene

Function for BTBD19 Gene

Phenotypes From GWAS Catalog for BTBD19 Gene

Gene Ontology (GO) - Molecular Function for BTBD19 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IEA --
genes like me logo Genes that share ontologies with BTBD19: view

Animal Model Products

CRISPR Products

miRNA for BTBD19 Gene

miRTarBase miRNAs that target BTBD19

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for BTBD19

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for BTBD19 Gene

Localization for BTBD19 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for BTBD19 gene
Compartment Confidence
nucleus 2
extracellular 1
cytosol 1

Subcellular locations from the

Human Protein Atlas (HPA)

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for BTBD19 Gene

Pathways & Interactions for BTBD19 Gene

PathCards logo

SuperPathways for BTBD19 Gene

No Data Available

Interacting Proteins for BTBD19 Gene

Gene Ontology (GO) - Biological Process for BTBD19 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BTBD19 Gene

Drugs & Compounds for BTBD19 Gene

No Compound Related Data Available

Transcripts for BTBD19 Gene

mRNA/cDNA for BTBD19 Gene

1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
9 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for BTBD19

Alternative Splicing Database (ASD) splice patterns (SP) for BTBD19 Gene

No ASD Table

Relevant External Links for BTBD19 Gene

GeneLoc Exon Structure for
BTBD19

Expression for BTBD19 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for BTBD19 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for BTBD19

SOURCE GeneReport for Unigene cluster for BTBD19 Gene:

Hs.632400
genes like me logo Genes that share expression patterns with BTBD19: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BTBD19 Gene

Orthologs for BTBD19 Gene

This gene was present in the common ancestor of animals.

Orthologs for BTBD19 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia BTBD19 30 31
  • 98.97 (n)
OneToOne
Mouse
(Mus musculus)
Mammalia Btbd19 31
  • 90 (a)
OneToOne
Cow
(Bos Taurus)
Mammalia BTBD19 30 31
  • 88.66 (n)
OneToOne
Rat
(Rattus norvegicus)
Mammalia LOC100361234 30
  • 84.03 (n)
Dog
(Canis familiaris)
Mammalia BTBD19 31
  • 79 (a)
OneToOne
Platypus
(Ornithorhynchus anatinus)
Mammalia BTBD19 31
  • 50 (a)
OneToOne
Oppossum
(Monodelphis domestica)
Mammalia BTBD19 31
  • 31 (a)
OneToOne
Chicken
(Gallus gallus)
Aves BTBD19 30 31
  • 60.48 (n)
OneToOne
Lizard
(Anolis carolinensis)
Reptilia BTBD19 31
  • 52 (a)
OneToOne
Tropical Clawed Frog
(Silurana tropicalis)
Amphibia btbd19 30
  • 57.63 (n)
Zebrafish
(Danio rerio)
Actinopterygii btbd3a 31
  • 14 (a)
ManyToMany
Fruit Fly
(Drosophila melanogaster)
Insecta CG7102 30 31
  • 43.86 (n)
OneToOne
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP010439 30
  • 40.28 (n)
Species where no ortholog for BTBD19 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)

Evolution for BTBD19 Gene

ENSEMBL:
Gene Tree for BTBD19 (if available)
TreeFam:
Gene Tree for BTBD19 (if available)
Aminode:
Evolutionary constrained regions (ECRs) for BTBD19: view image

Paralogs for BTBD19 Gene

No data available for Paralogs for BTBD19 Gene

Variants for BTBD19 Gene

Additional dbSNP identifiers (rs#s) for BTBD19 Gene

Structural Variations from Database of Genomic Variants (DGV) for BTBD19 Gene

Variant ID Type Subtype PubMed ID
nsv461406 CNV loss 19166990
nsv546145 CNV loss 21841781
nsv546146 CNV loss 21841781
nsv950705 CNV deletion 24416366

Variation tolerance for BTBD19 Gene

Gene Damage Index Score: 1.58; 30.50% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for BTBD19 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BTBD19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for BTBD19 Gene

Disorders for BTBD19 Gene

No disorders were found for BTBD19 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BTBD19 Gene

Publications for BTBD19 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4
  2. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory SG … Prigmore E (Nature 2006) 4

Products for BTBD19 Gene

Sources for BTBD19 Gene