Aliases for BRI3P2 Gene

Aliases for BRI3P2 Gene

  • Brain Protein I3 Pseudogene 2 2 3
  • Brain Protein I3 (BR13) Pseudogene 5
  • AC026310.1 5

External Ids for BRI3P2 Gene

Previous GeneCards Identifiers for BRI3P2 Gene

  • GC12M025013
  • GC12M025121

Summaries for BRI3P2 Gene

GeneCards Summary for BRI3P2 Gene

BRI3P2 (Brain Protein I3 Pseudogene 2) is a Pseudogene.

Additional gene information for BRI3P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for BRI3P2 Gene

Genomics for BRI3P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for BRI3P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J024965 Enhancer 0.2 Ensembl 600.7 +0.7 704 2 BRI3P2 lnc-BCAT1-3 C12orf77 LOC107984475 BCAT1 LOC645177
GH12J024960 Enhancer 0.7 Ensembl 0.4 +7.0 7008 0.6 CTCF JUND ZNF143 PKNOX1 REST RAD21 TRIM22 CBX3 RUNX3 ZNF316 LOC107984475 BRI3P2 lnc-BCAT1-3 ENSG00000255921 BCAT1 LOC645177
GH12J024991 Enhancer 0.8 Ensembl ENCODE 0.4 -24.2 -24197 0.6 CTCF REST RAD21 TRIM22 GATAD2B ARID3A ZNF639 ZNF10 ZSCAN5C SMC3 C12orf77 piR-56759-108 LOC645177 BRI3P2 lnc-BCAT1-3 BCAT1
GH12J024977 Enhancer 0.7 Ensembl 0.4 -10.4 -10397 5 RFX1 IKZF1 PKNOX1 SCRT2 CTBP1 NFE2 ZNF316 MAFG BCOR MAFK C12orf77 BCAT1 IRAG2 BRI3P2 lnc-BCAT1-3 piR-56759-108 LOC645177
GH12J024958 Enhancer 0.2 Ensembl 0.4 +8.7 8703 0.8 LOC107984475 BCAT1 ENSG00000255921 BRI3P2 lnc-BCAT1-3 LOC645177
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around BRI3P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for BRI3P2 Gene

Genomic Locations for BRI3P2 Gene
chr12:24,967,127-24,967,504
(GRCh38/hg38)
Size:
378 bases
Orientation:
Minus strand
chr12:25,120,061-25,120,438
(GRCh37/hg19)
Size:
378 bases
Orientation:
Minus strand

Genomic View for BRI3P2 Gene

Genes around BRI3P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BRI3P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BRI3P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BRI3P2 Gene

Proteins for BRI3P2 Gene

Post-translational modifications for BRI3P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BRI3P2 Gene

Domains & Families for BRI3P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for BRI3P2 Gene

Function for BRI3P2 Gene

Phenotypes From GWAS Catalog for BRI3P2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BRI3P2 Gene

Localization for BRI3P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BRI3P2 Gene

Pathways & Interactions for BRI3P2 Gene

PathCards logo

SuperPathways for BRI3P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for BRI3P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for BRI3P2 Gene

Drugs & Compounds for BRI3P2 Gene

No Compound Related Data Available

Transcripts for BRI3P2 Gene

mRNA/cDNA for BRI3P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for BRI3P2 Gene

No ASD Table

Relevant External Links for BRI3P2 Gene

GeneLoc Exon Structure for
BRI3P2

Expression for BRI3P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for BRI3P2 Gene

genes like me logo Genes that share expression patterns with BRI3P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BRI3P2 Gene

Orthologs for BRI3P2 Gene

Evolution for BRI3P2 Gene

ENSEMBL:
Gene Tree for BRI3P2 (if available)
TreeFam:
Gene Tree for BRI3P2 (if available)

No data available for Orthologs for BRI3P2 Gene

Paralogs for BRI3P2 Gene

No data available for Paralogs for BRI3P2 Gene

Variants for BRI3P2 Gene

Variation tolerance for BRI3P2 Gene

Gene Damage Index Score: 3.67; 57.04% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for BRI3P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BRI3P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Structural Variations from Database of Genomic Variants (DGV) for BRI3P2 Gene

Disorders for BRI3P2 Gene

No disorders were found for BRI3P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for BRI3P2 Gene

Publications for BRI3P2 Gene

No publications were found for BRI3P2 Gene.

No data available for Mastermind for BRI3P2 Gene

Products for BRI3P2 Gene

Sources for BRI3P2 Gene