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Aliases for BRD9P1 Gene

Subcategory (RNA class) for BRD9P1 Gene

lncRNA

Aliases for BRD9P1 Gene

  • Bromodomain Containing 9 Pseudogene 1 2 3 5

External Ids for BRD9P1 Gene

ORGUL Members for BRD9P1 Gene

Previous GeneCards Identifiers for BRD9P1 Gene

  • GC00U936290
  • GC11P066404
  • GC11P066407
  • GC11P066410
  • GC11P066412
  • GC11P066414
  • GC11P066416

Summaries for BRD9P1 Gene

GeneCards Summary for BRD9P1 Gene

BRD9P1 (Bromodomain Containing 9 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for BRD9P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BRD9P1 Gene

Genomics for BRD9P1 Gene

GeneHancer (GH) Regulatory Elements for BRD9P1 Gene

Promoters and enhancers for BRD9P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I066389 Enhancer 0.7 ENCODE 550.8 -0.4 -434 0.2 CTCF ESRRA RB1 MAX SIN3A RAD21 ZNF143 SMC3 SMARCC2 ZNF444 BRD9P1 ENSG00000276918
GH11I066508 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.7 +120.5 120520 2.9 FOXA2 ARNT ARID4B SIN3A DMAP1 ZNF2 IRF4 YY1 SLC30A9 ZNF213 BBS1 ENSG00000256349 ENSG00000258297 RBM14 RBM4 DPP3 EIF1AD KDM2A PCNX3 ENSG00000245156
GH11I066694 Enhancer 1.2 Ensembl ENCODE 10.3 +305.2 305241 1 HDGF ARNT ARID4B SIN3A ZNF2 IRF4 SLC30A9 E2F8 ZNF143 DEK SPTBN2 C11orf80 RCE1 ACTN3 ZDHHC24 LRFN4 PC RNU7-23P BRD9P1 RNU1-84P
GH11I066458 Enhancer 0.6 ENCODE 10.8 +69.8 69809 1.1 NR2F1 EBF1 DPF2 IRF4 ZNF316 IKZF1 NBN ATF7 RUNX3 IKZF2 ACTN3 ENSG00000201733 LOC100505504 NPAS4 RNU1-84P BRD9P1 ZDHHC24 RAD9A GC11P066455 MRPL11
GH11I066454 Enhancer 0.4 FANTOM5 11.1 +64.8 64793 0.2 STAT1 GC11P066455 LOC100505524 DPP3 LOC101928069 RBM4 NPAS4 LOC100505504 BRD9P1 RNU1-84P CD248
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around BRD9P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for BRD9P1 Gene

Genomic Locations for BRD9P1 Gene
chr11:66,389,609-66,390,168
(GRCh38/hg38)
Size:
560 bases
Orientation:
Plus strand
chr11:66,157,080-66,157,639
(GRCh37/hg19)

Genomic View for BRD9P1 Gene

Genes around BRD9P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BRD9P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BRD9P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BRD9P1 Gene

Proteins for BRD9P1 Gene

Post-translational modifications for BRD9P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BRD9P1 Gene

Domains & Families for BRD9P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BRD9P1 Gene

Function for BRD9P1 Gene

Phenotypes From GWAS Catalog for BRD9P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BRD9P1 Gene

Localization for BRD9P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BRD9P1 Gene

Pathways & Interactions for BRD9P1 Gene

SuperPathways for BRD9P1 Gene

No Data Available

Interacting Proteins for BRD9P1 Gene

Gene Ontology (GO) - Biological Process for BRD9P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BRD9P1 Gene

Drugs & Compounds for BRD9P1 Gene

No Compound Related Data Available

Transcripts for BRD9P1 Gene

mRNA/cDNA for BRD9P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BRD9P1 Gene

No ASD Table

Relevant External Links for BRD9P1 Gene

GeneLoc Exon Structure for
BRD9P1
ECgene alternative splicing isoforms for
BRD9P1

Expression for BRD9P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of BRD9P1 Gene:

BRD9P1
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BRD9P1 Gene

Orthologs for BRD9P1 Gene

Evolution for BRD9P1 Gene

ENSEMBL:
Gene Tree for BRD9P1 (if available)
TreeFam:
Gene Tree for BRD9P1 (if available)

No data available for Orthologs for BRD9P1 Gene

Paralogs for BRD9P1 Gene

No data available for Paralogs for BRD9P1 Gene

Variants for BRD9P1 Gene

Additional Variant Information for BRD9P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BRD9P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BRD9P1 Gene

Disorders for BRD9P1 Gene

No disorders were found for BRD9P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for BRD9P1 Gene

Publications for BRD9P1 Gene

No publications were found for BRD9P1 Gene.

Products for BRD9P1 Gene

Sources for BRD9P1 Gene

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