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Aliases for BRD7P3 Gene

Aliases for BRD7P3 Gene

  • Bromodomain Containing 7 Pseudogene 3 2 3
  • Bromodomain Containing Protein 75 KDa Pseudogene 3
  • Z99496.1 5
  • BP75 3

External Ids for BRD7P3 Gene

Previous GeneCards Identifiers for BRD7P3 Gene

  • GC06P118931
  • GC06P118932
  • GC06P118822
  • GC06P116404

Summaries for BRD7P3 Gene

GeneCards Summary for BRD7P3 Gene

BRD7P3 (Bromodomain Containing 7 Pseudogene 3) is a Pseudogene.

Additional gene information for BRD7P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BRD7P3 Gene

Genomics for BRD7P3 Gene

GeneHancer (GH) Regulatory Elements for BRD7P3 Gene

Promoters and enhancers for BRD7P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I118536 Enhancer 1.5 VISTA FANTOM5 dbSUPER 0.3 +36.0 35955 2.6 HDAC1 PKNOX1 ATF1 CHAMP1 NCOA2 TCF12 ZNF766 ATF7 CREM ZEB2 PLN SSXP10 BRD7P3 CEP85L
GH06I118505 Enhancer 0.7 dbSUPER 0.4 +5.8 5768 3.7 CTCF TEAD4 TAL1 CEBPG RAD21 IRF9 TCF12 ZNF316 BRD9 NCOR1 SSXP10 CEP85L BRD7P3 PLN
GH06I118469 Enhancer 0.8 ENCODE 0.3 -32.1 -32120 0.2 SOX13 TFAP4 FOXA2 NFIB SAP130 FEZF1 ZNF366 HOMEZ MIXL1 GATAD2A LOC105377971 BRD7P3 CEP85L
GH06I118509 Enhancer 0.5 dbSUPER 0.4 +8.3 8293 1.3 CTCF ZNF654 SMC3 RAD21 CEP85L BRD7P3 PLN
GH06I118548 Promoter/Enhancer 1 EPDnew dbSUPER 0.2 +46.9 46906 0.1 PKNOX1 ZNF316 MAFG MAFK EMSY PLN BRD7P3 CEP85L
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around BRD7P3 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the BRD7P3 gene promoter:

Genomic Locations for BRD7P3 Gene

Genomic Locations for BRD7P3 Gene
chr6:118,501,373-118,503,846
(GRCh38/hg38)
Size:
2,474 bases
Orientation:
Plus strand
chr6:118,822,536-118,825,009
(GRCh37/hg19)

Genomic View for BRD7P3 Gene

Genes around BRD7P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BRD7P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BRD7P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BRD7P3 Gene

Proteins for BRD7P3 Gene

Post-translational modifications for BRD7P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BRD7P3 Gene

Domains & Families for BRD7P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BRD7P3 Gene

Function for BRD7P3 Gene

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BRD7P3 Gene

Localization for BRD7P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BRD7P3 Gene

Pathways & Interactions for BRD7P3 Gene

SuperPathways for BRD7P3 Gene

No Data Available

Interacting Proteins for BRD7P3 Gene

Gene Ontology (GO) - Biological Process for BRD7P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BRD7P3 Gene

Drugs & Compounds for BRD7P3 Gene

No Compound Related Data Available

Transcripts for BRD7P3 Gene

mRNA/cDNA for BRD7P3 Gene

(3) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for BRD7P3 Gene

Bromodomain containing 7 pseudogene 3:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for BRD7P3 Gene

No ASD Table

Relevant External Links for BRD7P3 Gene

GeneLoc Exon Structure for
BRD7P3
ECgene alternative splicing isoforms for
BRD7P3

Expression for BRD7P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BRD7P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of BRD7P3 Gene:

BRD7P3

SOURCE GeneReport for Unigene cluster for BRD7P3 Gene:

Hs.648050
genes like me logo Genes that share expression patterns with BRD7P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BRD7P3 Gene

Orthologs for BRD7P3 Gene

Evolution for BRD7P3 Gene

ENSEMBL:
Gene Tree for BRD7P3 (if available)
TreeFam:
Gene Tree for BRD7P3 (if available)

No data available for Orthologs for BRD7P3 Gene

Paralogs for BRD7P3 Gene

No data available for Paralogs for BRD7P3 Gene

Variants for BRD7P3 Gene

Sequence variations from dbSNP and Humsavar for BRD7P3 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1001107669 -- 118,502,306(+) C/T non_coding_transcript_variant
rs1001989064 -- 118,504,087(+) T/C downstream_transcript_variant
rs1002359712 -- 118,504,337(+) T/C downstream_transcript_variant
rs1003512055 -- 118,504,079(+) T/C downstream_transcript_variant
rs1004064987 -- 118,501,106(+) G/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for BRD7P3 Gene

Variant ID Type Subtype PubMed ID
dgv10918n54 CNV gain 21841781
dgv10919n54 CNV gain 21841781
dgv1213e214 CNV gain 21293372
dgv1826e212 CNV gain 25503493
esv3610513 CNV loss 21293372
esv3890931 CNV gain 25118596
nsv1019357 CNV gain 25217958
nsv1020463 CNV gain 25217958
nsv1020586 CNV gain 25217958
nsv1034448 CNV gain 25217958
nsv1161446 CNV duplication 26073780
nsv464029 CNV gain 19166990
nsv525179 CNV gain 19592680
nsv604555 CNV gain 21841781

Additional Variant Information for BRD7P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BRD7P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for BRD7P3 Gene

Disorders for BRD7P3 Gene

Additional Disease Information for BRD7P3

No disorders were found for BRD7P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BRD7P3 Gene

Publications for BRD7P3 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  2. Identification and molecular characterization of BP75, a novel bromodomain-containing protein. (PMID: 10526152) Cuppen E … Hendriks W (FEBS letters 1999) 3 58

Products for BRD7P3 Gene

Sources for BRD7P3 Gene

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