Free for academic non-profit institutions. Other users need a Commercial license

Aliases for BRCC3P1 Gene

Aliases for BRCC3P1 Gene

  • BRCA1/BRCA2-Containing Complex Subunit 3 Pseudogene 1 2 3 5
  • BRCA1/BRCA2-Containing Complex, Subunit 3 Pseudogene 1 2

External Ids for BRCC3P1 Gene

Summaries for BRCC3P1 Gene

GeneCards Summary for BRCC3P1 Gene

BRCC3P1 (BRCA1/BRCA2-Containing Complex Subunit 3 Pseudogene 1) is a Pseudogene.

Additional gene information for BRCC3P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BRCC3P1 Gene

Genomics for BRCC3P1 Gene

GeneHancer (GH) Regulatory Elements for BRCC3P1 Gene

Promoters and enhancers for BRCC3P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I176529 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 4.7 +226.2 226244 10.3 HDGF PKNOX1 SMAD1 FOXA2 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 RNF44 GC05P176534 ENSG00000250909 NSD1 ENSG00000251414 FAF2 RPL21P60 ZNF346-IT1 UIMC1 CDHR2
GH05I176821 Enhancer 0.8 ENCODE 13.3 +514.4 514397 1.3 PKNOX1 NFIB KLF17 ZNF335 GLIS2 RCOR1 FOS EGR2 GATAD2B SMARCB1 LOC105377750 BRCC3P1 HK3 UNC5A GC05M176812
GH05I175377 Enhancer 1 ENCODE 9.8 -929.3 -929263 2.4 PKNOX1 ARNT FEZF1 ZNF2 ZNF213 ZNF548 FOS KLF13 SP3 ZNF662 ENSG00000250909 ENSG00000251414 BRCC3P1 DRD1 ARL2BPP6
GH05I175708 Enhancer 0.7 dbSUPER 13.5 -597.2 -597185 4.8 PKNOX1 ZNF280D ZBTB21 MAX MNT ZIC2 ZNF843 ZNF335 ZNF324 ZFHX2 BRCC3P1 RNU6-226P GC05P175702 GC05M175706 HRH2
GH05I176340 Enhancer 0.8 ENCODE 0.3 +33.9 33907 2.6 PKNOX1 FOXA2 NFIB RARA TCF12 ZNF121 ATF7 ZEB2 NFIL3 NFIC KIAA1191 ARL10 MIR1271 SIMC1 FAM153B ENSG00000250909 GC05M176181 BRCC3P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around BRCC3P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for BRCC3P1 Gene

Genomic Locations for BRCC3P1 Gene
chr5:176,308,055-176,309,210
(GRCh38/hg38)
Size:
1,156 bases
Orientation:
Plus strand
chr5:175,735,066-175,736,016
(GRCh37/hg19)

Genomic View for BRCC3P1 Gene

Genes around BRCC3P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BRCC3P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BRCC3P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BRCC3P1 Gene

Proteins for BRCC3P1 Gene

Post-translational modifications for BRCC3P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BRCC3P1 Gene

Domains & Families for BRCC3P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BRCC3P1 Gene

Function for BRCC3P1 Gene

Phenotypes From GWAS Catalog for BRCC3P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BRCC3P1 Gene

Localization for BRCC3P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BRCC3P1 Gene

Pathways & Interactions for BRCC3P1 Gene

SuperPathways for BRCC3P1 Gene

No Data Available

Interacting Proteins for BRCC3P1 Gene

Gene Ontology (GO) - Biological Process for BRCC3P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BRCC3P1 Gene

Drugs & Compounds for BRCC3P1 Gene

No Compound Related Data Available

Transcripts for BRCC3P1 Gene

mRNA/cDNA for BRCC3P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BRCC3P1 Gene

No ASD Table

Relevant External Links for BRCC3P1 Gene

GeneLoc Exon Structure for
BRCC3P1
ECgene alternative splicing isoforms for
BRCC3P1

Expression for BRCC3P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BRCC3P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of BRCC3P1 Gene:

BRCC3P1
genes like me logo Genes that share expression patterns with BRCC3P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BRCC3P1 Gene

Orthologs for BRCC3P1 Gene

Evolution for BRCC3P1 Gene

ENSEMBL:
Gene Tree for BRCC3P1 (if available)
TreeFam:
Gene Tree for BRCC3P1 (if available)

No data available for Orthologs for BRCC3P1 Gene

Paralogs for BRCC3P1 Gene

No data available for Paralogs for BRCC3P1 Gene

Variants for BRCC3P1 Gene

Additional Variant Information for BRCC3P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BRCC3P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BRCC3P1 Gene

Disorders for BRCC3P1 Gene

No disorders were found for BRCC3P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for BRCC3P1 Gene

Publications for BRCC3P1 Gene

No publications were found for BRCC3P1 Gene.

Products for BRCC3P1 Gene

Sources for BRCC3P1 Gene

Content
Loading form....