Free for academic non-profit institutions. Other users need a Commercial license

Aliases for BOLA3-AS1 Gene

Subcategory (RNA class) for BOLA3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for BOLA3-AS1 Gene

  • BOLA3 Antisense RNA 1 (Head To Head) 2 3 5
  • BOLA3 Antisense RNA 1 (Non-Protein Coding) 2
  • BOLA3 Antisense RNA 1 2

External Ids for BOLA3-AS1 Gene

Previous GeneCards Identifiers for BOLA3-AS1 Gene

  • GC02P074379

Summaries for BOLA3-AS1 Gene

GeneCards Summary for BOLA3-AS1 Gene

BOLA3-AS1 (BOLA3 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for BOLA3-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BOLA3-AS1 Gene

Genomics for BOLA3-AS1 Gene

GeneHancer (GH) Regulatory Elements for BOLA3-AS1 Gene

Promoters and enhancers for BOLA3-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I074146 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 567.2 -0.1 -62 2.7 HDGF MLX ARNT ARID4B SIN3A DMAP1 YY1 CBX5 ZNF213 ZNF143 BOLA3-AS1 BOLA3 TTC31 AUP1 MOGS CCDC142 ENSG00000273245 DUSP11 PCGF1 LOC107985899
GH02I074177 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 26.7 +30.5 30535 2.3 HDGF PKNOX1 ARID4B SIN3A DMAP1 IRF4 YY1 POLR2B ZNF766 ZNF207 MOB1A BOLA3-AS1 LOC107985899 DUSP11 HTRA2 BOLA3 MTHFD2 ENSG00000273245 AUP1 DGUOK-AS1
GH02I074196 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 20.6 +50.8 50766 3.9 CLOCK FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 ENSG00000279070 MTHFD2 PCGF1 DUSP11 INO80B ENSG00000273245 WBP1 AUP1 TTC31 MOB1A
GH02I074181 Enhancer 1.3 FANTOM5 Ensembl ENCODE 24.4 +34.0 33980 2.1 HDGF IRF4 TCF12 ATF7 RUNX3 JUNB NCOA1 GMEB1 SMARCA4 NBN BOLA3-AS1 BOLA3 LOC107985899 MOB1A TET3 NAT8B ENSG00000279201
GH02I074184 Enhancer 1.4 FANTOM5 Ensembl ENCODE 21.7 +38.4 38439 4.8 HDGF PKNOX1 ATF1 TCF12 GATA2 ZNF207 ATF7 RUNX3 JUNB NCOA1 BOLA3-AS1 LOC107985899 BOLA3 FNBP1P1 MOB1A MTHFD2 TET3 LBX2 ENSG00000279201
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around BOLA3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for BOLA3-AS1 Gene

Genomic Locations for BOLA3-AS1 Gene
chr2:74,147,981-74,152,389
(GRCh38/hg38)
Size:
4,409 bases
Orientation:
Plus strand
chr2:74,375,136-74,377,188
(GRCh37/hg19)

Genomic View for BOLA3-AS1 Gene

Genes around BOLA3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BOLA3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BOLA3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BOLA3-AS1 Gene

Proteins for BOLA3-AS1 Gene

Post-translational modifications for BOLA3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BOLA3-AS1 Gene

Domains & Families for BOLA3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BOLA3-AS1 Gene

Function for BOLA3-AS1 Gene

Phenotypes for BOLA3-AS1 Gene

genes like me logo Genes that share phenotypes with BOLA3-AS1: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BOLA3-AS1 Gene

Localization for BOLA3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BOLA3-AS1 Gene

Pathways & Interactions for BOLA3-AS1 Gene

SuperPathways for BOLA3-AS1 Gene

No Data Available

Interacting Proteins for BOLA3-AS1 Gene

Gene Ontology (GO) - Biological Process for BOLA3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BOLA3-AS1 Gene

Drugs & Compounds for BOLA3-AS1 Gene

No Compound Related Data Available

Transcripts for BOLA3-AS1 Gene

mRNA/cDNA for BOLA3-AS1 Gene

(8) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for BOLA3-AS1 Gene

BOLA3 antisense RNA 1 (head to head):
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for BOLA3-AS1 Gene

No ASD Table

Relevant External Links for BOLA3-AS1 Gene

GeneLoc Exon Structure for
BOLA3-AS1
ECgene alternative splicing isoforms for
BOLA3-AS1

Expression for BOLA3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BOLA3-AS1 Gene

SOURCE GeneReport for Unigene cluster for BOLA3-AS1 Gene:

Hs.503348
genes like me logo Genes that share expression patterns with BOLA3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BOLA3-AS1 Gene

Orthologs for BOLA3-AS1 Gene

Evolution for BOLA3-AS1 Gene

ENSEMBL:
Gene Tree for BOLA3-AS1 (if available)
TreeFam:
Gene Tree for BOLA3-AS1 (if available)

No data available for Orthologs for BOLA3-AS1 Gene

Paralogs for BOLA3-AS1 Gene

No data available for Paralogs for BOLA3-AS1 Gene

Variants for BOLA3-AS1 Gene

Sequence variations from dbSNP and Humsavar for BOLA3-AS1 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs761339384 uncertain-significance, Multiple mitochondrial dysfunctions syndrome 74,147,909(+) G/A upstream_transcript_variant
rs886056327 uncertain-significance, Multiple mitochondrial dysfunctions syndrome 74,147,882(+) C/T upstream_transcript_variant
rs531409597 benign, not specified 74,147,830(+) C/A/G upstream_transcript_variant
rs1000094086 -- 74,148,899(+) G/A non_coding_transcript_variant
rs1000334840 -- 74,149,847(+) C/A genic_downstream_transcript_variant, non_coding_transcript_variant

Additional Variant Information for BOLA3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BOLA3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BOLA3-AS1 Gene

Disorders for BOLA3-AS1 Gene

Additional Disease Information for BOLA3-AS1

No disorders were found for BOLA3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BOLA3-AS1 Gene

Publications for BOLA3-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for BOLA3-AS1 Gene

Sources for BOLA3-AS1 Gene

Content
Loading form....